PlantSME Plant secondary metabolism enzyme database

Arabidopsis suecica (arabidopsis_suecica)

Imported from atlas release summary for Arabidopsis suecica.

2799
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 847 19 BAHD (382) View species results
Alkaloid pathway 618 19 SGD (119) View species results
Phenylpropanoid pathway 580 11 POD (265) View species results
Flavonoid pathway 318 12 UFGT (202) View species results
Rosmarinic acid pathway 226 7 C4H (90) View species results
Steroid pathway 210 13 SMT1/SMT2/SMT3 (85) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2620 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
ara_suecica_KAG7536470.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7538291.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7539409.1 Alkaloid G8O/G8H low borderline
ara_suecica_KAG7544734.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7545483.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7547723.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7547812.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7554824.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7563595.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7563931.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7564403.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7565516.1 Alkaloid G8O/G8H low borderline
ara_suecica_KAG7575160.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7581810.1 Alkaloid G8O/G8H low borderline
ara_suecica_KAG7582647.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7588819.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7589107.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7590124.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7596859.1 Alkaloid G8O/G8H medium pass
ara_suecica_KAG7608781.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7608783.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7611586.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7613306.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7621168.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7622494.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7623216.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7632022.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7635165.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7640803.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7641771.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7642213.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7654499.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7657055.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7657825.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7658461.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7658465.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7658583.1 Alkaloid G8O/G8H low borderline
ara_suecica_KAG7659558.1 Alkaloid G8O/G8H medium borderline
ara_suecica_KAG7659559.1 Alkaloid G8O/G8H medium borderline