PlantSME Plant secondary metabolism enzyme database

Arabidopsis suecica (arabidopsis_suecica)

Imported from atlas release summary for Arabidopsis suecica.

2799
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 847 19 BAHD (382) View species results
Alkaloid pathway 618 19 SGD (119) View species results
Phenylpropanoid pathway 580 11 POD (265) View species results
Flavonoid pathway 318 12 UFGT (202) View species results
Rosmarinic acid pathway 226 7 C4H (90) View species results
Steroid pathway 210 13 SMT1/SMT2/SMT3 (85) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2620 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
ara_suecica_KAG7538762.1 Alkaloid T16H medium borderline
ara_suecica_KAG7547809.1 Alkaloid T16H medium borderline
ara_suecica_KAG7547811.1 Alkaloid T16H medium borderline
ara_suecica_KAG7554105.1 Alkaloid T16H medium borderline
ara_suecica_KAG7554394.1 Alkaloid T16H medium borderline
ara_suecica_KAG7563664.1 Alkaloid T16H medium borderline
ara_suecica_KAG7564887.1 Alkaloid T16H medium borderline
ara_suecica_KAG7565186.1 Alkaloid T16H medium borderline
ara_suecica_KAG7566245.1 Alkaloid T16H medium borderline
ara_suecica_KAG7572131.1 Alkaloid T16H medium pass
ara_suecica_KAG7572134.1 Alkaloid T16H low borderline
ara_suecica_KAG7572910.1 Alkaloid T16H medium borderline
ara_suecica_KAG7573100.1 Alkaloid T16H medium borderline
ara_suecica_KAG7573138.1 Alkaloid T16H medium borderline
ara_suecica_KAG7573140.1 Alkaloid T16H medium borderline
ara_suecica_KAG7573598.1 Alkaloid T16H medium borderline
ara_suecica_KAG7573599.1 Alkaloid T16H medium borderline
ara_suecica_KAG7580510.1 Alkaloid T16H medium borderline
ara_suecica_KAG7581036.1 Alkaloid T16H medium borderline
ara_suecica_KAG7582640.1 Alkaloid T16H medium borderline
ara_suecica_KAG7582641.1 Alkaloid T16H medium borderline
ara_suecica_KAG7582642.1 Alkaloid T16H medium borderline
ara_suecica_KAG7582643.1 Alkaloid T16H medium borderline
ara_suecica_KAG7582644.1 Alkaloid T16H medium borderline
ara_suecica_KAG7582646.1 Alkaloid T16H medium borderline
ara_suecica_KAG7582649.1 Alkaloid T16H medium borderline
ara_suecica_KAG7582761.1 Alkaloid T16H medium borderline
ara_suecica_KAG7595504.1 Alkaloid T16H medium borderline
ara_suecica_KAG7596688.1 Alkaloid T16H medium borderline
ara_suecica_KAG7596690.1 Alkaloid T16H medium borderline
ara_suecica_KAG7608114.1 Alkaloid T16H medium borderline
ara_suecica_KAG7608382.1 Alkaloid T16H medium borderline
ara_suecica_KAG7610324.1 Alkaloid T16H medium borderline
ara_suecica_KAG7610900.1 Alkaloid T16H medium borderline
ara_suecica_KAG7610903.1 Alkaloid T16H medium borderline
ara_suecica_KAG7611587.1 Alkaloid T16H medium borderline
ara_suecica_KAG7612668.1 Alkaloid T16H low borderline
ara_suecica_KAG7620296.1 Alkaloid T16H medium borderline
ara_suecica_KAG7620298.1 Alkaloid T16H medium borderline
ara_suecica_KAG7620565.1 Alkaloid T16H medium borderline
ara_suecica_KAG7620567.1 Alkaloid T16H medium borderline
ara_suecica_KAG7629885.1 Alkaloid T16H medium borderline
ara_suecica_KAG7630309.1 Alkaloid T16H medium borderline
ara_suecica_KAG7630744.1 Alkaloid T16H medium borderline
ara_suecica_KAG7631918.1 Alkaloid T16H medium borderline
ara_suecica_KAG7631919.1 Alkaloid T16H medium borderline
ara_suecica_KAG7631920.1 Alkaloid T16H medium borderline
ara_suecica_KAG7631921.1 Alkaloid T16H medium borderline
ara_suecica_KAG7631924.1 Alkaloid T16H medium borderline
ara_suecica_KAG7632021.1 Alkaloid T16H medium borderline