PlantSME Plant secondary metabolism enzyme database

Arabidopsis suecica (arabidopsis_suecica)

Imported from atlas release summary for Arabidopsis suecica.

2799
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 847 19 BAHD (382) View species results
Alkaloid pathway 618 19 SGD (119) View species results
Phenylpropanoid pathway 580 11 POD (265) View species results
Flavonoid pathway 318 12 UFGT (202) View species results
Rosmarinic acid pathway 226 7 C4H (90) View species results
Steroid pathway 210 13 SMT1/SMT2/SMT3 (85) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2620 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX1/CYP85A1
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Gene Pathway Family Confidence Status
ara_suecica_KAG7536428.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7546816.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7548371.1 Steroid BR6OX1/CYP85A1 low borderline
ara_suecica_KAG7572349.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7573598.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7582526.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7582527.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7588361.1 Steroid BR6OX1/CYP85A1 low borderline
ara_suecica_KAG7588992.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7610320.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7610343.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7612147.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7620560.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7620562.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7620563.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7622879.1 Steroid BR6OX1/CYP85A1 low borderline
ara_suecica_KAG7632498.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7642105.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7642427.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7642447.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7642448.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7643087.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7643088.1 Steroid BR6OX1/CYP85A1 medium borderline
ara_suecica_KAG7658544.1 Steroid BR6OX1/CYP85A1 medium borderline