PlantSME Plant secondary metabolism enzyme database

Arabidopsis suecica (arabidopsis_suecica)

Imported from atlas release summary for Arabidopsis suecica.

2799
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 847 19 BAHD (382) View species results
Alkaloid pathway 618 19 SGD (119) View species results
Phenylpropanoid pathway 580 11 POD (265) View species results
Flavonoid pathway 318 12 UFGT (202) View species results
Rosmarinic acid pathway 226 7 C4H (90) View species results
Steroid pathway 210 13 SMT1/SMT2/SMT3 (85) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2620 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
ara_suecica_KAG7644328.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7644402.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7644408.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7644409.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7644581.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7644582.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7644583.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7644584.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7654071.1 Steroid DWF4/CYP90B1 medium borderline
ara_suecica_KAG7654111.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7654112.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7654113.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7654114.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7654120.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7655413.1 Steroid DWF4/CYP90B1 medium borderline
ara_suecica_KAG7656108.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7656298.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7656381.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7658461.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7658625.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7658699.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7658982.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7659417.1 Steroid DWF4/CYP90B1 medium borderline
ara_suecica_KAG7659558.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7659559.1 Steroid DWF4/CYP90B1 low borderline
ara_suecica_KAG7660019.1 Steroid DWF4/CYP90B1 medium borderline