PlantSME Plant secondary metabolism enzyme database

Arabidopsis suecica (arabidopsis_suecica)

Imported from atlas release summary for Arabidopsis suecica.

3434
Candidate Protein Records
2799
Pathway-Level Records
6872
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 847 19 BAHD (382) View species results
Alkaloid pathway 618 19 SGD (119) View species results
Phenylpropanoid pathway 580 11 POD (265) View species results
Flavonoid pathway 318 12 UFGT (202) View species results
Rosmarinic acid pathway 226 7 C4H (90) View species results
Steroid pathway 210 13 SMT1/SMT2/SMT3 (85) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2620 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Protein/Isoform Record Pathway Family Confidence Status
ara_suecica_KAG7642642.1 Flavonoid F3H medium borderline
ara_suecica_KAG7643348.1 Flavonoid F3H medium borderline
ara_suecica_KAG7643530.1 Flavonoid F3H medium borderline
ara_suecica_KAG7644319.1 Flavonoid F3H medium borderline
ara_suecica_KAG7652924.1 Flavonoid F3H medium borderline
ara_suecica_KAG7653021.1 Flavonoid F3H medium borderline
ara_suecica_KAG7653024.1 Flavonoid F3H medium borderline
ara_suecica_KAG7653112.1 Flavonoid F3H medium borderline
ara_suecica_KAG7653311.1 Flavonoid F3H medium borderline
ara_suecica_KAG7653312.1 Flavonoid F3H medium borderline
ara_suecica_KAG7653313.1 Flavonoid F3H medium borderline
ara_suecica_KAG7653314.1 Flavonoid F3H medium borderline
ara_suecica_KAG7653315.1 Flavonoid F3H medium borderline
ara_suecica_KAG7653987.1 Flavonoid F3H medium borderline
ara_suecica_KAG7654237.1 Flavonoid F3H low borderline
ara_suecica_KAG7654568.1 Flavonoid F3H medium borderline
ara_suecica_KAG7654569.1 Flavonoid F3H medium borderline
ara_suecica_KAG7655703.1 Flavonoid F3H low borderline
ara_suecica_KAG7656412.1 Flavonoid F3H low borderline
ara_suecica_KAG7656941.1 Flavonoid F3H medium borderline
ara_suecica_KAG7657292.1 Flavonoid F3H low borderline
ara_suecica_KAG7657293.1 Flavonoid F3H low borderline
ara_suecica_KAG7657294.1 Flavonoid F3H low borderline
ara_suecica_KAG7657295.1 Flavonoid F3H low borderline
ara_suecica_KAG7657573.1 Flavonoid F3H medium borderline
ara_suecica_KAG7658009.1 Flavonoid F3H medium borderline
ara_suecica_KAG7658182.1 Flavonoid F3H medium borderline
ara_suecica_KAG7659889.1 Flavonoid F3H medium borderline
ara_suecica_KAG7660015.1 Flavonoid F3H medium borderline
ara_suecica_KAG7660025.1 Flavonoid F3H medium borderline
ara_suecica_KAG7660242.1 Flavonoid F3H low borderline
ara_suecica_KAG7660243.1 Flavonoid F3H low borderline
ara_suecica_KAG7660244.1 Flavonoid F3H low borderline
ara_suecica_KAG7660245.1 Flavonoid F3H low borderline