PlantSME Plant secondary metabolism enzyme database

Arabidopsis suecica (arabidopsis_suecica)

Imported from atlas release summary for Arabidopsis suecica.

2799
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 847 19 BAHD (382) View species results
Alkaloid pathway 618 19 SGD (119) View species results
Phenylpropanoid pathway 580 11 POD (265) View species results
Flavonoid pathway 318 12 UFGT (202) View species results
Rosmarinic acid pathway 226 7 C4H (90) View species results
Steroid pathway 210 13 SMT1/SMT2/SMT3 (85) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2620 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
ara_suecica_KAG7611691.1 Alkaloid H6H high pass
ara_suecica_KAG7611692.1 Alkaloid H6H medium borderline
ara_suecica_KAG7612251.1 Alkaloid H6H medium borderline
ara_suecica_KAG7612604.1 Alkaloid H6H low borderline
ara_suecica_KAG7614066.1 Alkaloid H6H medium borderline
ara_suecica_KAG7614067.1 Alkaloid H6H medium borderline
ara_suecica_KAG7614068.1 Alkaloid H6H medium borderline
ara_suecica_KAG7614069.1 Alkaloid H6H medium pass
ara_suecica_KAG7619456.1 Alkaloid H6H low borderline
ara_suecica_KAG7619458.1 Alkaloid H6H low borderline
ara_suecica_KAG7619459.1 Alkaloid H6H low borderline
ara_suecica_KAG7619988.1 Alkaloid H6H medium borderline
ara_suecica_KAG7621314.1 Alkaloid H6H medium pass
ara_suecica_KAG7621504.1 Alkaloid H6H low borderline
ara_suecica_KAG7630812.1 Alkaloid H6H low borderline
ara_suecica_KAG7630814.1 Alkaloid H6H medium borderline
ara_suecica_KAG7630815.1 Alkaloid H6H medium borderline
ara_suecica_KAG7632076.1 Alkaloid H6H medium borderline
ara_suecica_KAG7633562.1 Alkaloid H6H low borderline
ara_suecica_KAG7634010.1 Alkaloid H6H high pass
ara_suecica_KAG7634589.1 Alkaloid H6H medium borderline
ara_suecica_KAG7635444.1 Alkaloid H6H low borderline
ara_suecica_KAG7640644.1 Alkaloid H6H low borderline
ara_suecica_KAG7642014.1 Alkaloid H6H medium pass
ara_suecica_KAG7653315.1 Alkaloid H6H medium borderline
ara_suecica_KAG7653987.1 Alkaloid H6H medium borderline
ara_suecica_KAG7654235.1 Alkaloid H6H low borderline
ara_suecica_KAG7654236.1 Alkaloid H6H low borderline
ara_suecica_KAG7654237.1 Alkaloid H6H low borderline
ara_suecica_KAG7654414.1 Alkaloid H6H low borderline
ara_suecica_KAG7655703.1 Alkaloid H6H low borderline
ara_suecica_KAG7656788.1 Alkaloid H6H low borderline
ara_suecica_KAG7657292.1 Alkaloid H6H low borderline
ara_suecica_KAG7657293.1 Alkaloid H6H low borderline
ara_suecica_KAG7657294.1 Alkaloid H6H low borderline
ara_suecica_KAG7657295.1 Alkaloid H6H low borderline
ara_suecica_KAG7659889.1 Alkaloid H6H medium borderline
ara_suecica_KAG7660169.1 Alkaloid H6H low borderline
ara_suecica_KAG7660247.1 Alkaloid H6H low borderline