PlantSME Plant secondary metabolism enzyme database

Arabidopsis suecica (arabidopsis_suecica)

Imported from atlas release summary for Arabidopsis suecica.

3434
Candidate Protein Records
2799
Pathway-Level Records
6872
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 847 19 BAHD (382) View species results
Alkaloid pathway 618 19 SGD (119) View species results
Phenylpropanoid pathway 580 11 POD (265) View species results
Flavonoid pathway 318 12 UFGT (202) View species results
Rosmarinic acid pathway 226 7 C4H (90) View species results
Steroid pathway 210 13 SMT1/SMT2/SMT3 (85) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2620 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Protein/Isoform Record Pathway Family Confidence Status Best Target
ara_suecica_KAG7632023.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
ara_suecica_KAG7632024.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
ara_suecica_KAG7632498.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
ara_suecica_KAG7633679.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
ara_suecica_KAG7633681.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
ara_suecica_KAG7633941.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
ara_suecica_KAG7640300.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
ara_suecica_KAG7642214.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
ara_suecica_KAG7642426.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
ara_suecica_KAG7642427.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
ara_suecica_KAG7642597.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
ara_suecica_KAG7642631.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
ara_suecica_KAG7642633.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
ara_suecica_KAG7643087.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
ara_suecica_KAG7643088.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
ara_suecica_KAG7652680.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
ara_suecica_KAG7653939.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
ara_suecica_KAG7654113.1 Alkaloid T16H low borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO
ara_suecica_KAG7655763.1 Alkaloid T16H medium borderline T16H__00001__sp_P98183_C71DC_CATRO
ara_suecica_KAG7658464.1 Alkaloid T16H medium borderline T16H__00002__sp_U5HKE8_C71DZ_CATRO