PlantSME Plant secondary metabolism enzyme database

Arabidopsis suecica (arabidopsis_suecica)

Imported from atlas release summary for Arabidopsis suecica.

3434
Candidate Protein Records
2799
Pathway-Level Records
6872
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 847 19 BAHD (382) View species results
Alkaloid pathway 618 19 SGD (119) View species results
Phenylpropanoid pathway 580 11 POD (265) View species results
Flavonoid pathway 318 12 UFGT (202) View species results
Rosmarinic acid pathway 226 7 C4H (90) View species results
Steroid pathway 210 13 SMT1/SMT2/SMT3 (85) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2620 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
ara_suecica_KAG7643348.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7643530.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7644319.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7652924.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7653021.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7653024.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7653112.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7653311.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7653312.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7653313.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7653314.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7654415.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7654568.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7654569.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7655910.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7656941.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7657097.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7657573.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7658009.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7658182.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7660015.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7660025.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7660242.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7660243.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7660244.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7660245.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7660248.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7538901.1 Alkaloid COR medium pass
ara_suecica_KAG7553712.1 Alkaloid COR medium pass
ara_suecica_KAG7565591.1 Alkaloid COR medium pass
ara_suecica_KAG7574004.1 Alkaloid COR medium pass
ara_suecica_KAG7574005.1 Alkaloid COR medium pass
ara_suecica_KAG7574007.1 Alkaloid COR medium pass
ara_suecica_KAG7588223.1 Alkaloid COR medium pass
ara_suecica_KAG7588224.1 Alkaloid COR medium pass
ara_suecica_KAG7588225.1 Alkaloid COR medium pass
ara_suecica_KAG7607752.1 Alkaloid COR medium pass
ara_suecica_KAG7607753.1 Alkaloid COR medium pass
ara_suecica_KAG7613927.1 Alkaloid COR medium pass
ara_suecica_KAG7634330.1 Alkaloid COR medium pass
ara_suecica_KAG7643474.1 Alkaloid COR medium pass
ara_suecica_KAG7643475.1 Alkaloid COR medium pass
ara_suecica_KAG7643477.1 Alkaloid COR medium pass
ara_suecica_KAG7657910.1 Alkaloid COR medium pass
ara_suecica_KAG7554109.1 Alkaloid CYP719 low borderline
ara_suecica_KAG7563544.1 Alkaloid CYP719 low borderline
ara_suecica_KAG7588820.1 Alkaloid CYP719 medium borderline
ara_suecica_KAG7589515.1 Alkaloid CYP719 medium borderline
ara_suecica_KAG7607784.1 Alkaloid CYP719 low borderline
ara_suecica_KAG7608118.1 Alkaloid CYP719 low borderline