PlantSME Plant secondary metabolism enzyme database

Arabidopsis suecica (arabidopsis_suecica)

Imported from atlas release summary for Arabidopsis suecica.

3434
Candidate Protein Records
2799
Pathway-Level Records
6872
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 847 19 BAHD (382) View species results
Alkaloid pathway 618 19 SGD (119) View species results
Phenylpropanoid pathway 580 11 POD (265) View species results
Flavonoid pathway 318 12 UFGT (202) View species results
Rosmarinic acid pathway 226 7 C4H (90) View species results
Steroid pathway 210 13 SMT1/SMT2/SMT3 (85) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2620 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
ara_suecica_KAG7641977.1 Alkaloid IO medium borderline
ara_suecica_KAG7642105.1 Alkaloid IO medium borderline
ara_suecica_KAG7644543.1 Alkaloid IO medium borderline
ara_suecica_KAG7652665.1 Alkaloid IO medium borderline
ara_suecica_KAG7653947.1 Alkaloid IO medium borderline
ara_suecica_KAG7654500.1 Alkaloid IO medium borderline
ara_suecica_KAG7658625.1 Alkaloid IO medium borderline
ara_suecica_KAG7659417.1 Alkaloid IO medium borderline
ara_suecica_KAG7660123.1 Alkaloid IO medium pass
ara_suecica_KAG7538346.1 Alkaloid ISY low borderline
ara_suecica_KAG7546358.1 Alkaloid ISY high pass
ara_suecica_KAG7613489.1 Alkaloid ISY medium pass
ara_suecica_KAG7621606.1 Alkaloid ISY high pass
ara_suecica_KAG7623324.1 Alkaloid ISY low borderline
ara_suecica_KAG7623328.1 Alkaloid ISY low borderline
ara_suecica_KAG7538019.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7538139.1 Alkaloid LAMT medium pass
ara_suecica_KAG7546094.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7546095.1 Alkaloid LAMT medium pass
ara_suecica_KAG7548347.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7548349.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7548351.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7548363.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7548464.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7554080.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7564491.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7564493.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7580892.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7582888.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7582889.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7589122.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7589126.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7589334.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7597100.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7608086.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7608087.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7611061.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7611064.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7611065.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7611067.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7611075.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7611154.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7613068.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7613195.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7614430.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7621877.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7621883.1 Alkaloid LAMT low borderline
ara_suecica_KAG7623102.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7630855.1 Alkaloid LAMT medium borderline
ara_suecica_KAG7632135.1 Alkaloid LAMT medium borderline