PlantSME Plant secondary metabolism enzyme database

Arabidopsis suecica (arabidopsis_suecica)

Imported from atlas release summary for Arabidopsis suecica.

2799
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 847 19 BAHD (382) View species results
Alkaloid pathway 618 19 SGD (119) View species results
Phenylpropanoid pathway 580 11 POD (265) View species results
Flavonoid pathway 318 12 UFGT (202) View species results
Rosmarinic acid pathway 226 7 C4H (90) View species results
Steroid pathway 210 13 SMT1/SMT2/SMT3 (85) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2620 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
ara_suecica_KAG7611082.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7614046.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7619568.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7619569.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7620050.1 Rosmarinic Acid 4CL low borderline
ara_suecica_KAG7620381.1 Rosmarinic Acid 4CL low borderline
ara_suecica_KAG7621023.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7621024.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7621556.1 Rosmarinic Acid 4CL low borderline
ara_suecica_KAG7630212.1 Rosmarinic Acid 4CL low borderline
ara_suecica_KAG7631443.1 Rosmarinic Acid 4CL low borderline
ara_suecica_KAG7631534.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7632051.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7632052.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7632053.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7632341.1 Rosmarinic Acid 4CL low borderline
ara_suecica_KAG7633753.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7640492.1 Rosmarinic Acid 4CL low borderline
ara_suecica_KAG7641119.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7644614.1 Rosmarinic Acid 4CL low borderline
ara_suecica_KAG7644615.1 Rosmarinic Acid 4CL low borderline
ara_suecica_KAG7654188.1 Rosmarinic Acid 4CL low borderline
ara_suecica_KAG7654964.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7654965.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7654967.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7654968.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7654969.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7654970.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7654971.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7654975.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7655087.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7655088.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7655967.1 Rosmarinic Acid 4CL low borderline
ara_suecica_KAG7655968.1 Rosmarinic Acid 4CL low borderline
ara_suecica_KAG7656946.1 Rosmarinic Acid 4CL low borderline
ara_suecica_KAG7657174.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7658229.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7658402.1 Rosmarinic Acid 4CL low borderline
ara_suecica_KAG7658482.1 Rosmarinic Acid 4CL low borderline
ara_suecica_KAG7658483.1 Rosmarinic Acid 4CL low borderline
ara_suecica_KAG7658566.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7658567.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7658568.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7658592.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7658839.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7659715.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7659751.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7659877.1 Rosmarinic Acid 4CL medium pass
ara_suecica_KAG7659916.1 Rosmarinic Acid 4CL low borderline
ara_suecica_KAG7536337.1 Rosmarinic Acid C4H low borderline