PlantSME Plant secondary metabolism enzyme database

Arabidopsis suecica (arabidopsis_suecica)

Imported from atlas release summary for Arabidopsis suecica.

2799
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 847 19 BAHD (382) View species results
Alkaloid pathway 618 19 SGD (119) View species results
Phenylpropanoid pathway 580 11 POD (265) View species results
Flavonoid pathway 318 12 UFGT (202) View species results
Rosmarinic acid pathway 226 7 C4H (90) View species results
Steroid pathway 210 13 SMT1/SMT2/SMT3 (85) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2620 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
ara_suecica_KAG7620353.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7620565.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7620567.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7620569.1 Steroid BR6OX2/CYP85A2 medium borderline
ara_suecica_KAG7620570.1 Steroid BR6OX2/CYP85A2 medium borderline
ara_suecica_KAG7621168.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7623217.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7623460.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7623461.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7629691.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7629885.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7630309.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7630744.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7630745.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7631249.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7631918.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7631919.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7631921.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7631922.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7631924.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7632021.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7632022.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7632023.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7632024.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7632609.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7632615.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7632692.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7634251.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7635289.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7640557.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7640803.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7641620.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7641770.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7642213.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7642297.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7642597.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7642631.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7643846.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7644081.1 Steroid BR6OX2/CYP85A2 medium borderline
ara_suecica_KAG7644411.1 Steroid BR6OX2/CYP85A2 medium borderline
ara_suecica_KAG7644454.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7644543.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7652665.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7652680.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7652718.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7653939.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7654115.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7654121.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7654187.1 Steroid BR6OX2/CYP85A2 low borderline
ara_suecica_KAG7654574.1 Steroid BR6OX2/CYP85A2 low borderline