PlantSME Plant secondary metabolism enzyme database

Arabidopsis suecica (arabidopsis_suecica)

Imported from atlas release summary for Arabidopsis suecica.

3434
Candidate Protein Records
2799
Pathway-Level Records
6872
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 847 19 BAHD (382) View species results
Alkaloid pathway 618 19 SGD (119) View species results
Phenylpropanoid pathway 580 11 POD (265) View species results
Flavonoid pathway 318 12 UFGT (202) View species results
Rosmarinic acid pathway 226 7 C4H (90) View species results
Steroid pathway 210 13 SMT1/SMT2/SMT3 (85) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2620 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
ara_suecica_KAG7611770.1 Alkaloid T3O medium borderline
ara_suecica_KAG7612073.1 Alkaloid T3O medium pass
ara_suecica_KAG7612147.1 Alkaloid T3O medium borderline
ara_suecica_KAG7613310.1 Alkaloid T3O medium borderline
ara_suecica_KAG7614052.1 Alkaloid T3O low borderline
ara_suecica_KAG7614528.1 Alkaloid T3O medium borderline
ara_suecica_KAG7619122.1 Alkaloid T3O low borderline
ara_suecica_KAG7620179.1 Alkaloid T3O medium borderline
ara_suecica_KAG7620180.1 Alkaloid T3O medium borderline
ara_suecica_KAG7620353.1 Alkaloid T3O medium borderline
ara_suecica_KAG7620569.1 Alkaloid T3O medium pass
ara_suecica_KAG7620570.1 Alkaloid T3O medium pass
ara_suecica_KAG7621054.1 Alkaloid T3O medium pass
ara_suecica_KAG7621055.1 Alkaloid T3O medium pass
ara_suecica_KAG7621056.1 Alkaloid T3O medium pass
ara_suecica_KAG7621169.1 Alkaloid T3O medium borderline
ara_suecica_KAG7622548.1 Alkaloid T3O medium borderline
ara_suecica_KAG7622549.1 Alkaloid T3O medium borderline
ara_suecica_KAG7622551.1 Alkaloid T3O medium borderline
ara_suecica_KAG7622575.1 Alkaloid T3O medium pass
ara_suecica_KAG7623084.1 Alkaloid T3O medium borderline
ara_suecica_KAG7623094.1 Alkaloid T3O medium pass
ara_suecica_KAG7623215.1 Alkaloid T3O medium borderline
ara_suecica_KAG7623218.1 Alkaloid T3O medium borderline
ara_suecica_KAG7623219.1 Alkaloid T3O medium borderline
ara_suecica_KAG7623222.1 Alkaloid T3O medium borderline
ara_suecica_KAG7623225.1 Alkaloid T3O medium borderline
ara_suecica_KAG7629691.1 Alkaloid T3O low borderline
ara_suecica_KAG7631136.1 Alkaloid T3O medium pass
ara_suecica_KAG7631810.1 Alkaloid T3O medium pass
ara_suecica_KAG7631922.1 Alkaloid T3O medium borderline
ara_suecica_KAG7632614.1 Alkaloid T3O medium borderline
ara_suecica_KAG7632615.1 Alkaloid T3O medium borderline
ara_suecica_KAG7632616.1 Alkaloid T3O medium borderline
ara_suecica_KAG7632617.1 Alkaloid T3O medium borderline
ara_suecica_KAG7632618.1 Alkaloid T3O medium borderline
ara_suecica_KAG7632619.1 Alkaloid T3O medium borderline
ara_suecica_KAG7632620.1 Alkaloid T3O medium borderline
ara_suecica_KAG7632623.1 Alkaloid T3O medium borderline
ara_suecica_KAG7632624.1 Alkaloid T3O medium borderline
ara_suecica_KAG7632625.1 Alkaloid T3O medium borderline
ara_suecica_KAG7632626.1 Alkaloid T3O medium borderline
ara_suecica_KAG7632627.1 Alkaloid T3O medium borderline
ara_suecica_KAG7632692.1 Alkaloid T3O medium borderline
ara_suecica_KAG7632927.1 Alkaloid T3O medium borderline
ara_suecica_KAG7633053.1 Alkaloid T3O medium pass
ara_suecica_KAG7633334.1 Alkaloid T3O medium pass
ara_suecica_KAG7633678.1 Alkaloid T3O medium borderline
ara_suecica_KAG7633680.1 Alkaloid T3O medium borderline
ara_suecica_KAG7633682.1 Alkaloid T3O medium borderline