PlantSME Plant secondary metabolism enzyme database

Arabidopsis suecica (arabidopsis_suecica)

Imported from atlas release summary for Arabidopsis suecica.

3434
Candidate Protein Records
2799
Pathway-Level Records
6872
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 847 19 BAHD (382) View species results
Alkaloid pathway 618 19 SGD (119) View species results
Phenylpropanoid pathway 580 11 POD (265) View species results
Flavonoid pathway 318 12 UFGT (202) View species results
Rosmarinic acid pathway 226 7 C4H (90) View species results
Steroid pathway 210 13 SMT1/SMT2/SMT3 (85) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2620 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
ara_suecica_KAG7655992.1 Alkaloid BBE medium borderline
ara_suecica_KAG7655998.1 Alkaloid BBE medium borderline
ara_suecica_KAG7656385.1 Alkaloid BBE medium borderline
ara_suecica_KAG7539529.1 Alkaloid CNMT low borderline
ara_suecica_KAG7545267.1 Alkaloid CNMT medium borderline
ara_suecica_KAG7553735.1 Alkaloid CNMT low borderline
ara_suecica_KAG7553736.1 Alkaloid CNMT low borderline
ara_suecica_KAG7555620.1 Alkaloid CNMT low borderline
ara_suecica_KAG7573155.1 Alkaloid CNMT low borderline
ara_suecica_KAG7588609.1 Alkaloid CNMT low borderline
ara_suecica_KAG7588610.1 Alkaloid CNMT low borderline
ara_suecica_KAG7589121.1 Alkaloid CNMT low borderline
ara_suecica_KAG7589517.1 Alkaloid CNMT low borderline
ara_suecica_KAG7589520.1 Alkaloid CNMT low borderline
ara_suecica_KAG7596948.1 Alkaloid CNMT low borderline
ara_suecica_KAG7596950.1 Alkaloid CNMT low borderline
ara_suecica_KAG7607733.1 Alkaloid CNMT low borderline
ara_suecica_KAG7622696.1 Alkaloid CNMT medium borderline
ara_suecica_KAG7622697.1 Alkaloid CNMT medium borderline
ara_suecica_KAG7642650.1 Alkaloid CNMT low borderline
ara_suecica_KAG7654205.1 Alkaloid CNMT low borderline
ara_suecica_KAG7658653.1 Alkaloid CNMT low borderline
ara_suecica_KAG7658984.1 Alkaloid CNMT low borderline
ara_suecica_KAG7658985.1 Alkaloid CNMT low borderline
ara_suecica_KAG7536610.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7536611.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7537552.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7538565.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7546220.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7546231.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7546522.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7546725.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7547344.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7554218.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7554219.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7554444.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7554486.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7555024.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7555932.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7555947.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7565133.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7566320.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7573146.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7573604.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7573854.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7574920.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7581725.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7581824.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7581995.1 Alkaloid CODM/T6ODM medium borderline
ara_suecica_KAG7582498.1 Alkaloid CODM/T6ODM medium borderline