PlantSME Plant secondary metabolism enzyme database

Barbula amplexifolia (barbula_amplexifolia)

Imported from atlas release summary for Barbula amplexifolia.

691
Family-Level Assignments
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Phenylpropanoid pathway 180 12 POD (89) View species results
Terpenoid pathway 152 19 BAHD (64) View species results
Alkaloid pathway 132 19 PYKS (28) View species results
Flavonoid pathway 107 11 PAL (27) View species results
Rosmarinic acid pathway 81 7 PAL (27) View species results
Steroid pathway 39 12 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 23 604 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 113 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Gene Pathway Family Confidence Status
BAampscaffold_100019130 Flavonoid PAL high pass
BAampscaffold_100023310 Flavonoid PAL high pass
BAampscaffold_100023340 Flavonoid PAL high pass
BAampscaffold_100023370 Flavonoid PAL high pass
BAampscaffold_100023390 Flavonoid PAL high pass
BAampscaffold_100030090 Flavonoid PAL medium pass
BAampscaffold_100030100 Flavonoid PAL high pass
BAampscaffold_100030130 Flavonoid PAL medium pass
BAampscaffold_100030140 Flavonoid PAL high pass
BAampscaffold_100030220 Flavonoid PAL high pass
BAampscaffold_100030300 Flavonoid PAL high pass
BAampscaffold_130072330 Flavonoid PAL high pass
BAampscaffold_20115090 Flavonoid PAL high pass
BAampscaffold_20118280 Flavonoid PAL high pass
BAampscaffold_20118320 Flavonoid PAL high pass
BAampscaffold_40140830 Flavonoid PAL high pass
BAampscaffold_40145860 Flavonoid PAL medium pass
BAampscaffold_40145870 Flavonoid PAL high pass
BAampscaffold_40145890 Flavonoid PAL high pass
BAampscaffold_60191010 Flavonoid PAL high pass
BAampscaffold_70218670 Flavonoid PAL high pass
BAampscaffold_90243510 Flavonoid PAL high pass
BAampscaffold_90243520 Flavonoid PAL medium pass
BAampscaffold_90243530 Flavonoid PAL high pass
BAampscaffold_90243560 Flavonoid PAL high pass
BAampscaffold_90243580 Flavonoid PAL high pass
BAampscaffold_10000570 Flavonoid UFGT medium pass
BAampscaffold_10000620 Flavonoid UFGT medium pass
BAampscaffold_100019880 Flavonoid UFGT medium pass
BAampscaffold_100024320 Flavonoid UFGT medium pass
BAampscaffold_110032260 Flavonoid UFGT low borderline
BAampscaffold_110033400 Flavonoid UFGT medium pass
BAampscaffold_110043650 Flavonoid UFGT medium pass
BAampscaffold_130065810 Flavonoid UFGT medium pass
BAampscaffold_130071230 Flavonoid UFGT medium pass
BAampscaffold_20102660 Flavonoid UFGT medium pass
BAampscaffold_20105390 Flavonoid UFGT medium pass
BAampscaffold_20113550 Flavonoid UFGT medium pass
BAampscaffold_30121870 Flavonoid UFGT medium pass
BAampscaffold_30124110 Flavonoid UFGT medium pass
BAampscaffold_30130130 Flavonoid UFGT medium pass
BAampscaffold_30135110 Flavonoid UFGT high pass
BAampscaffold_40139810 Flavonoid UFGT low borderline
BAampscaffold_40140910 Flavonoid UFGT medium pass
BAampscaffold_40141590 Flavonoid UFGT medium pass
BAampscaffold_50164000 Flavonoid UFGT medium pass
BAampscaffold_50173050 Flavonoid UFGT medium pass
BAampscaffold_80234700 Flavonoid UFGT low borderline
BAampscaffold_90239430 Flavonoid UFGT high pass
BAampscaffold_90240340 Flavonoid UFGT medium pass