PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1221
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
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Gene Pathway Family Confidence Status Best Target
BOERETT00003471 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
BOERETT00003522 Steroid CAS medium pass CAS__00004__sp_O82139_CAS1_PANGI
BOERETT00003523 Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
BOERETT00003524 Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
BOERETT00003525 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
BOERETT00003527 Steroid CAS low borderline CAS__00014__sp_Q9SXV6_CAS1_GLYGL
BOERETT00008642 Steroid CAS medium pass CAS__00006__sp_Q2XPU6_CAS1_RICCO
BOERETT00013771 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
BOERETT00014004 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
BOERETT00017148 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
BOERETT00017150 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
BOERETT00017160 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
BOERETT00017165 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
BOERETT00017174 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
BOERETT00017177 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
BOERETT00026200 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
BOERETT00028479 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
BOERETT00028886 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
BOERETT00030299 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
BOERETT00034045 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
BOERETT00035989 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
BOERETT00036802 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
BOERETT00036803 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
BOERETT00051320 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
BOERETT00051323 Steroid CAS medium pass CAS__00006__sp_Q2XPU6_CAS1_RICCO
BOERETT00056715 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
BOERETT00057271 Steroid CAS medium pass CAS__00005__sp_P38605_CAS1_ARATH
BOERETT00057664 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
BOERETT00058263 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
BOERETT00059212 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
BOERETT00059818 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
BOERETT00060007 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
BOERETT00060172 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
BOERETT00060176 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
BOERETT00060660 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
BOERETT00060821 Steroid CAS medium pass CAS__00012__sp_Q9FN48_CAS_ARATH