PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1221
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
BOERETT00003347 Alkaloid CODM/T6ODM medium borderline
BOERETT00003348 Alkaloid CODM/T6ODM medium borderline
BOERETT00003574 Alkaloid CODM/T6ODM medium borderline
BOERETT00003586 Alkaloid CODM/T6ODM medium borderline
BOERETT00003732 Alkaloid CODM/T6ODM medium borderline
BOERETT00004109 Alkaloid CODM/T6ODM medium borderline
BOERETT00004155 Alkaloid CODM/T6ODM medium borderline
BOERETT00006846 Alkaloid CODM/T6ODM medium borderline
BOERETT00013305 Alkaloid CODM/T6ODM medium borderline
BOERETT00013306 Alkaloid CODM/T6ODM medium borderline
BOERETT00013509 Alkaloid CODM/T6ODM medium borderline
BOERETT00018873 Alkaloid CODM/T6ODM medium borderline
BOERETT00018874 Alkaloid CODM/T6ODM medium borderline
BOERETT00020313 Alkaloid CODM/T6ODM medium borderline
BOERETT00020319 Alkaloid CODM/T6ODM medium borderline
BOERETT00020321 Alkaloid CODM/T6ODM medium borderline
BOERETT00020435 Alkaloid CODM/T6ODM medium borderline
BOERETT00023356 Alkaloid CODM/T6ODM medium borderline
BOERETT00023543 Alkaloid CODM/T6ODM medium borderline
BOERETT00023587 Alkaloid CODM/T6ODM medium borderline
BOERETT00024136 Alkaloid CODM/T6ODM medium borderline
BOERETT00025066 Alkaloid CODM/T6ODM medium borderline
BOERETT00026075 Alkaloid CODM/T6ODM medium borderline
BOERETT00032150 Alkaloid CODM/T6ODM medium borderline
BOERETT00032364 Alkaloid CODM/T6ODM medium borderline
BOERETT00032980 Alkaloid CODM/T6ODM low borderline
BOERETT00032984 Alkaloid CODM/T6ODM medium borderline
BOERETT00033917 Alkaloid CODM/T6ODM medium borderline
BOERETT00033987 Alkaloid CODM/T6ODM medium borderline
BOERETT00035008 Alkaloid CODM/T6ODM medium borderline
BOERETT00035755 Alkaloid CODM/T6ODM medium borderline
BOERETT00035760 Alkaloid CODM/T6ODM medium borderline
BOERETT00035765 Alkaloid CODM/T6ODM medium borderline
BOERETT00036079 Alkaloid CODM/T6ODM medium borderline
BOERETT00036253 Alkaloid CODM/T6ODM medium borderline
BOERETT00037563 Alkaloid CODM/T6ODM medium borderline
BOERETT00037714 Alkaloid CODM/T6ODM medium borderline
BOERETT00037715 Alkaloid CODM/T6ODM medium borderline
BOERETT00037718 Alkaloid CODM/T6ODM medium borderline
BOERETT00040390 Alkaloid CODM/T6ODM medium borderline
BOERETT00041738 Alkaloid CODM/T6ODM medium borderline
BOERETT00041819 Alkaloid CODM/T6ODM medium borderline
BOERETT00041823 Alkaloid CODM/T6ODM medium borderline
BOERETT00043607 Alkaloid CODM/T6ODM medium borderline
BOERETT00043955 Alkaloid CODM/T6ODM medium borderline
BOERETT00045502 Alkaloid CODM/T6ODM medium borderline
BOERETT00045505 Alkaloid CODM/T6ODM medium borderline
BOERETT00045506 Alkaloid CODM/T6ODM medium borderline
BOERETT00045522 Alkaloid CODM/T6ODM medium borderline
BOERETT00049589 Alkaloid CODM/T6ODM medium borderline