PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1221
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
BOERETT00000121 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
BOERETT00001703 Terpenoid TPS medium pass TPS__00137__sp_J9RLZ7_TPS1_VALOF
BOERETT00001704 Terpenoid TPS medium pass TPS__00044__sp_A0A348AUW1_TPS1G_CAMHI
BOERETT00003471 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
BOERETT00008050 Terpenoid TPS medium pass TPS__00118__sp_G8H5N0_TPS17_SOLHA
BOERETT00017148 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
BOERETT00017150 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
BOERETT00017160 Terpenoid TPS low borderline TPS__00149__sp_P0DI76_CIN1_ARATH
BOERETT00017164 Terpenoid TPS low borderline TPS__00149__sp_P0DI76_CIN1_ARATH
BOERETT00017165 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
BOERETT00017174 Terpenoid TPS low borderline TPS__00149__sp_P0DI76_CIN1_ARATH
BOERETT00017176 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
BOERETT00017177 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
BOERETT00020174 Terpenoid TPS medium pass TPS__00040__sp_A0A348AUV6_TPS1B_CAMHI
BOERETT00028479 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
BOERETT00030299 Terpenoid TPS medium pass TPS__00040__sp_A0A348AUV6_TPS1B_CAMHI
BOERETT00030414 Terpenoid TPS medium pass TPS__00020__sp_A0A1V0QSF6_TS7FN_CANSA
BOERETT00034045 Terpenoid TPS medium pass TPS__00044__sp_A0A348AUW1_TPS1G_CAMHI
BOERETT00035989 Terpenoid TPS medium pass TPS__00168__sp_Q94JS8_FARS_CITJU
BOERETT00036802 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
BOERETT00036803 Terpenoid TPS low borderline TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
BOERETT00041635 Terpenoid TPS medium pass TPS__00115__sp_G5CV52_TPS17_SOLLC
BOERETT00042313 Terpenoid TPS medium pass TPS__00020__sp_A0A1V0QSF6_TS7FN_CANSA
BOERETT00042316 Terpenoid TPS low borderline TPS__00078__sp_D5KXD2_TPS12_SOLLC
BOERETT00048893 Terpenoid TPS medium pass TPS__00149__sp_P0DI76_CIN1_ARATH
BOERETT00056715 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
BOERETT00057664 Terpenoid TPS medium pass TPS__00040__sp_A0A348AUV6_TPS1B_CAMHI
BOERETT00060656 Terpenoid TPS medium pass TPS__00008__sp_A0A167V661_TPS8_CAMSI
BOERETT00060660 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI