PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1221
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
BOERETT00000288 Flavonoid F3H medium borderline
BOERETT00003347 Flavonoid F3H low borderline
BOERETT00003348 Flavonoid F3H medium borderline
BOERETT00003574 Flavonoid F3H medium borderline
BOERETT00003586 Flavonoid F3H medium borderline
BOERETT00003732 Flavonoid F3H medium borderline
BOERETT00004109 Flavonoid F3H medium borderline
BOERETT00004155 Flavonoid F3H medium borderline
BOERETT00004157 Flavonoid F3H medium borderline
BOERETT00006846 Flavonoid F3H medium borderline
BOERETT00007994 Flavonoid F3H low borderline
BOERETT00008525 Flavonoid F3H low borderline
BOERETT00008526 Flavonoid F3H low borderline
BOERETT00008529 Flavonoid F3H low borderline
BOERETT00008533 Flavonoid F3H low borderline
BOERETT00010090 Flavonoid F3H low borderline
BOERETT00010880 Flavonoid F3H medium borderline
BOERETT00012300 Flavonoid F3H low borderline
BOERETT00012421 Flavonoid F3H low borderline
BOERETT00012585 Flavonoid F3H medium borderline
BOERETT00013303 Flavonoid F3H medium borderline
BOERETT00013305 Flavonoid F3H medium borderline
BOERETT00013306 Flavonoid F3H medium borderline
BOERETT00013509 Flavonoid F3H medium borderline
BOERETT00013917 Flavonoid F3H medium borderline
BOERETT00018873 Flavonoid F3H medium borderline
BOERETT00020020 Flavonoid F3H low borderline
BOERETT00020313 Flavonoid F3H medium borderline
BOERETT00020319 Flavonoid F3H medium borderline
BOERETT00020321 Flavonoid F3H medium borderline
BOERETT00020435 Flavonoid F3H medium borderline
BOERETT00020643 Flavonoid F3H medium borderline
BOERETT00023356 Flavonoid F3H medium borderline
BOERETT00023543 Flavonoid F3H medium borderline
BOERETT00023587 Flavonoid F3H medium borderline
BOERETT00023742 Flavonoid F3H medium borderline
BOERETT00024136 Flavonoid F3H medium borderline
BOERETT00025066 Flavonoid F3H medium borderline
BOERETT00026075 Flavonoid F3H medium borderline
BOERETT00027790 Flavonoid F3H medium borderline
BOERETT00032364 Flavonoid F3H medium borderline
BOERETT00032984 Flavonoid F3H medium borderline
BOERETT00033795 Flavonoid F3H medium borderline
BOERETT00033917 Flavonoid F3H low borderline
BOERETT00033987 Flavonoid F3H low borderline
BOERETT00034277 Flavonoid F3H low borderline
BOERETT00034361 Flavonoid F3H low borderline
BOERETT00035008 Flavonoid F3H medium borderline
BOERETT00035755 Flavonoid F3H medium borderline
BOERETT00035760 Flavonoid F3H medium borderline