PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1221
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
BOERETT00006332 Alkaloid T16H medium borderline
BOERETT00011472 Alkaloid T16H medium borderline
BOERETT00011935 Alkaloid T16H medium borderline
BOERETT00012637 Alkaloid T16H medium borderline
BOERETT00012652 Alkaloid T16H medium borderline
BOERETT00015655 Alkaloid T16H medium borderline
BOERETT00016465 Alkaloid T16H medium borderline
BOERETT00017700 Alkaloid T16H low borderline
BOERETT00019145 Alkaloid T16H medium borderline
BOERETT00023506 Alkaloid T16H medium borderline
BOERETT00028525 Alkaloid T16H medium borderline
BOERETT00028540 Alkaloid T16H medium borderline
BOERETT00028544 Alkaloid T16H medium borderline
BOERETT00028882 Alkaloid T16H medium borderline
BOERETT00028889 Alkaloid T16H medium borderline
BOERETT00033868 Alkaloid T16H medium borderline
BOERETT00034138 Alkaloid T16H medium borderline
BOERETT00035471 Alkaloid T16H medium borderline
BOERETT00035972 Alkaloid T16H medium borderline
BOERETT00039529 Alkaloid T16H medium borderline
BOERETT00049769 Alkaloid T16H medium borderline
BOERETT00049896 Alkaloid T16H medium borderline
BOERETT00054272 Alkaloid T16H medium borderline
BOERETT00055822 Alkaloid T16H medium borderline
BOERETT00056051 Alkaloid T16H medium borderline
BOERETT00056116 Alkaloid T16H medium borderline
BOERETT00056122 Alkaloid T16H medium borderline
BOERETT00056403 Alkaloid T16H medium borderline
BOERETT00056697 Alkaloid T16H medium borderline
BOERETT00057673 Alkaloid T16H medium borderline
BOERETT00058815 Alkaloid T16H medium borderline
BOERETT00059788 Alkaloid T16H medium borderline