PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1221
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
BOERETT00002355 Rosmarinic Acid 4CL medium pass
BOERETT00002357 Rosmarinic Acid 4CL medium pass
BOERETT00002391 Rosmarinic Acid 4CL medium pass
BOERETT00002392 Rosmarinic Acid 4CL low borderline
BOERETT00003698 Rosmarinic Acid 4CL low borderline
BOERETT00003742 Rosmarinic Acid 4CL medium pass
BOERETT00005402 Rosmarinic Acid 4CL medium pass
BOERETT00005404 Rosmarinic Acid 4CL medium pass
BOERETT00005405 Rosmarinic Acid 4CL medium pass
BOERETT00005406 Rosmarinic Acid 4CL medium pass
BOERETT00005411 Rosmarinic Acid 4CL low borderline
BOERETT00005529 Rosmarinic Acid 4CL medium pass
BOERETT00008373 Rosmarinic Acid 4CL medium pass
BOERETT00014492 Rosmarinic Acid 4CL medium pass
BOERETT00015105 Rosmarinic Acid 4CL low borderline
BOERETT00018282 Rosmarinic Acid 4CL low borderline
BOERETT00019817 Rosmarinic Acid 4CL medium pass
BOERETT00019924 Rosmarinic Acid 4CL low borderline
BOERETT00025767 Rosmarinic Acid 4CL low borderline
BOERETT00025768 Rosmarinic Acid 4CL low borderline
BOERETT00030171 Rosmarinic Acid 4CL low borderline
BOERETT00032358 Rosmarinic Acid 4CL low borderline
BOERETT00032751 Rosmarinic Acid 4CL medium pass
BOERETT00034058 Rosmarinic Acid 4CL medium pass
BOERETT00036225 Rosmarinic Acid 4CL medium pass
BOERETT00036848 Rosmarinic Acid 4CL low borderline
BOERETT00037094 Rosmarinic Acid 4CL low borderline
BOERETT00038096 Rosmarinic Acid 4CL low borderline
BOERETT00039373 Rosmarinic Acid 4CL low borderline
BOERETT00039488 Rosmarinic Acid 4CL low borderline
BOERETT00040668 Rosmarinic Acid 4CL low borderline
BOERETT00041244 Rosmarinic Acid 4CL medium pass
BOERETT00042153 Rosmarinic Acid 4CL medium pass
BOERETT00044124 Rosmarinic Acid 4CL medium pass
BOERETT00045315 Rosmarinic Acid 4CL low borderline
BOERETT00047921 Rosmarinic Acid 4CL medium pass
BOERETT00047922 Rosmarinic Acid 4CL medium pass
BOERETT00049373 Rosmarinic Acid 4CL low borderline
BOERETT00056292 Rosmarinic Acid 4CL low borderline
BOERETT00056930 Rosmarinic Acid 4CL medium pass
BOERETT00059005 Rosmarinic Acid 4CL low borderline
BOERETT00061817 Rosmarinic Acid 4CL medium pass
BOERETT00001728 Rosmarinic Acid C4H low borderline
BOERETT00001729 Rosmarinic Acid C4H low borderline
BOERETT00002805 Rosmarinic Acid C4H low borderline
BOERETT00005303 Rosmarinic Acid C4H low borderline
BOERETT00006131 Rosmarinic Acid C4H low borderline
BOERETT00006332 Rosmarinic Acid C4H low borderline
BOERETT00008663 Rosmarinic Acid C4H low borderline
BOERETT00008810 Rosmarinic Acid C4H low borderline