PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1602
Candidate Protein Records
1221
Pathway-Level Records
3211
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
BOERETT00000704 Alkaloid T3O low borderline
BOERETT00002805 Alkaloid T3O medium pass
BOERETT00003582 Alkaloid T3O low borderline
BOERETT00005303 Alkaloid T3O medium pass
BOERETT00009816 Alkaloid T3O medium pass
BOERETT00009935 Alkaloid T3O medium borderline
BOERETT00009991 Alkaloid T3O medium borderline
BOERETT00010646 Alkaloid T3O low borderline
BOERETT00010648 Alkaloid T3O medium pass
BOERETT00011090 Alkaloid T3O medium borderline
BOERETT00011341 Alkaloid T3O medium pass
BOERETT00012349 Alkaloid T3O medium borderline
BOERETT00012443 Alkaloid T3O medium borderline
BOERETT00012444 Alkaloid T3O medium borderline
BOERETT00012447 Alkaloid T3O medium borderline
BOERETT00012448 Alkaloid T3O medium borderline
BOERETT00012495 Alkaloid T3O medium pass
BOERETT00013491 Alkaloid T3O medium pass
BOERETT00014658 Alkaloid T3O medium pass
BOERETT00017138 Alkaloid T3O medium borderline
BOERETT00017584 Alkaloid T3O medium borderline
BOERETT00017596 Alkaloid T3O medium borderline
BOERETT00017599 Alkaloid T3O medium borderline
BOERETT00017602 Alkaloid T3O medium borderline
BOERETT00017605 Alkaloid T3O medium borderline
BOERETT00017608 Alkaloid T3O medium borderline
BOERETT00017613 Alkaloid T3O medium borderline
BOERETT00017636 Alkaloid T3O medium borderline
BOERETT00019185 Alkaloid T3O low borderline
BOERETT00020296 Alkaloid T3O medium pass
BOERETT00020902 Alkaloid T3O medium pass
BOERETT00021588 Alkaloid T3O medium borderline
BOERETT00023365 Alkaloid T3O medium pass
BOERETT00023644 Alkaloid T3O medium borderline
BOERETT00023684 Alkaloid T3O low borderline
BOERETT00023851 Alkaloid T3O medium borderline
BOERETT00023897 Alkaloid T3O medium pass
BOERETT00024357 Alkaloid T3O low borderline
BOERETT00025968 Alkaloid T3O medium borderline
BOERETT00025969 Alkaloid T3O medium borderline
BOERETT00025972 Alkaloid T3O medium borderline
BOERETT00025973 Alkaloid T3O medium borderline
BOERETT00025974 Alkaloid T3O medium borderline
BOERETT00025975 Alkaloid T3O medium borderline
BOERETT00026338 Alkaloid T3O medium pass
BOERETT00026475 Alkaloid T3O medium borderline
BOERETT00026476 Alkaloid T3O medium borderline
BOERETT00026853 Alkaloid T3O medium borderline
BOERETT00027537 Alkaloid T3O medium borderline
BOERETT00028524 Alkaloid T3O medium borderline