PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1221
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
BOERETT00002355 Flavonoid 4CL medium pass
BOERETT00002357 Flavonoid 4CL medium pass
BOERETT00002391 Flavonoid 4CL medium pass
BOERETT00002392 Flavonoid 4CL low borderline
BOERETT00003698 Flavonoid 4CL low borderline
BOERETT00003742 Flavonoid 4CL medium pass
BOERETT00005402 Flavonoid 4CL medium pass
BOERETT00005404 Flavonoid 4CL medium pass
BOERETT00005405 Flavonoid 4CL medium pass
BOERETT00005406 Flavonoid 4CL medium pass
BOERETT00005411 Flavonoid 4CL low borderline
BOERETT00005529 Flavonoid 4CL medium pass
BOERETT00008373 Flavonoid 4CL medium pass
BOERETT00014492 Flavonoid 4CL medium pass
BOERETT00015105 Flavonoid 4CL low borderline
BOERETT00018282 Flavonoid 4CL low borderline
BOERETT00019817 Flavonoid 4CL medium pass
BOERETT00019924 Flavonoid 4CL low borderline
BOERETT00025767 Flavonoid 4CL low borderline
BOERETT00025768 Flavonoid 4CL low borderline
BOERETT00030171 Flavonoid 4CL low borderline
BOERETT00032358 Flavonoid 4CL low borderline
BOERETT00032751 Flavonoid 4CL medium pass
BOERETT00034058 Flavonoid 4CL medium pass
BOERETT00036225 Flavonoid 4CL medium pass
BOERETT00036848 Flavonoid 4CL low borderline
BOERETT00037094 Flavonoid 4CL low borderline
BOERETT00038096 Flavonoid 4CL low borderline
BOERETT00039373 Flavonoid 4CL low borderline
BOERETT00039488 Flavonoid 4CL low borderline
BOERETT00040668 Flavonoid 4CL low borderline
BOERETT00041244 Flavonoid 4CL medium pass
BOERETT00042153 Flavonoid 4CL medium pass
BOERETT00044124 Flavonoid 4CL medium pass
BOERETT00045315 Flavonoid 4CL low borderline
BOERETT00047921 Flavonoid 4CL medium pass
BOERETT00047922 Flavonoid 4CL medium pass
BOERETT00049373 Flavonoid 4CL low borderline
BOERETT00056292 Flavonoid 4CL low borderline
BOERETT00056930 Flavonoid 4CL medium pass
BOERETT00059005 Flavonoid 4CL low borderline
BOERETT00061817 Flavonoid 4CL medium pass
BOERETT00000125 Flavonoid ANR medium borderline
BOERETT00003407 Flavonoid ANR medium borderline
BOERETT00006053 Flavonoid ANR medium borderline
BOERETT00009100 Flavonoid ANR medium borderline
BOERETT00010249 Flavonoid ANR low borderline
BOERETT00012951 Flavonoid ANR medium borderline
BOERETT00012952 Flavonoid ANR medium borderline
BOERETT00012953 Flavonoid ANR medium borderline