PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1602
Candidate Protein Records
1221
Pathway-Level Records
3211
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BOERETT00015655 Flavonoid F3'H/CYP75B medium borderline
BOERETT00015656 Flavonoid F3'H/CYP75B medium borderline
BOERETT00017605 Flavonoid F3'H/CYP75B medium borderline
BOERETT00017636 Flavonoid F3'H/CYP75B medium borderline
BOERETT00019136 Flavonoid F3'H/CYP75B medium borderline
BOERETT00021588 Flavonoid F3'H/CYP75B medium borderline
BOERETT00023851 Flavonoid F3'H/CYP75B medium borderline
BOERETT00025839 Flavonoid F3'H/CYP75B medium borderline
BOERETT00025972 Flavonoid F3'H/CYP75B medium borderline
BOERETT00025973 Flavonoid F3'H/CYP75B medium borderline
BOERETT00026476 Flavonoid F3'H/CYP75B medium borderline
BOERETT00026909 Flavonoid F3'H/CYP75B low borderline
BOERETT00028535 Flavonoid F3'H/CYP75B medium borderline
BOERETT00028538 Flavonoid F3'H/CYP75B medium borderline
BOERETT00028539 Flavonoid F3'H/CYP75B medium borderline
BOERETT00028544 Flavonoid F3'H/CYP75B medium borderline
BOERETT00028546 Flavonoid F3'H/CYP75B medium borderline
BOERETT00028556 Flavonoid F3'H/CYP75B medium borderline
BOERETT00028838 Flavonoid F3'H/CYP75B medium borderline
BOERETT00029123 Flavonoid F3'H/CYP75B medium borderline
BOERETT00030813 Flavonoid F3'H/CYP75B low borderline
BOERETT00030814 Flavonoid F3'H/CYP75B low borderline
BOERETT00031652 Flavonoid F3'H/CYP75B medium borderline
BOERETT00031660 Flavonoid F3'H/CYP75B medium borderline
BOERETT00031663 Flavonoid F3'H/CYP75B medium borderline
BOERETT00031676 Flavonoid F3'H/CYP75B medium borderline
BOERETT00032296 Flavonoid F3'H/CYP75B medium borderline
BOERETT00032308 Flavonoid F3'H/CYP75B medium borderline
BOERETT00033591 Flavonoid F3'H/CYP75B medium borderline
BOERETT00034137 Flavonoid F3'H/CYP75B medium borderline
BOERETT00034139 Flavonoid F3'H/CYP75B medium borderline
BOERETT00034768 Flavonoid F3'H/CYP75B low borderline
BOERETT00035972 Flavonoid F3'H/CYP75B medium borderline
BOERETT00036233 Flavonoid F3'H/CYP75B low borderline
BOERETT00037649 Flavonoid F3'H/CYP75B medium borderline
BOERETT00041304 Flavonoid F3'H/CYP75B medium borderline
BOERETT00043596 Flavonoid F3'H/CYP75B low borderline
BOERETT00043927 Flavonoid F3'H/CYP75B medium borderline
BOERETT00043928 Flavonoid F3'H/CYP75B medium borderline
BOERETT00044045 Flavonoid F3'H/CYP75B medium borderline
BOERETT00044495 Flavonoid F3'H/CYP75B low borderline
BOERETT00045104 Flavonoid F3'H/CYP75B medium borderline
BOERETT00049490 Flavonoid F3'H/CYP75B medium borderline
BOERETT00050112 Flavonoid F3'H/CYP75B medium borderline
BOERETT00056116 Flavonoid F3'H/CYP75B medium borderline
BOERETT00056121 Flavonoid F3'H/CYP75B medium borderline
BOERETT00056122 Flavonoid F3'H/CYP75B medium borderline
BOERETT00058906 Flavonoid F3'H/CYP75B medium borderline
BOERETT00058979 Flavonoid F3'H/CYP75B medium borderline
BOERETT00000288 Flavonoid F3H medium borderline