PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1602
Candidate Protein Records
1221
Pathway-Level Records
3211
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BOERETT00049896 Flavonoid IFS medium borderline
BOERETT00051265 Flavonoid IFS low borderline
BOERETT00054271 Flavonoid IFS low borderline
BOERETT00054272 Flavonoid IFS low borderline
BOERETT00055804 Flavonoid IFS low borderline
BOERETT00055822 Flavonoid IFS low borderline
BOERETT00056403 Flavonoid IFS medium borderline
BOERETT00056697 Flavonoid IFS medium borderline
BOERETT00058123 Flavonoid IFS low borderline
BOERETT00058815 Flavonoid IFS medium borderline
BOERETT00058890 Flavonoid IFS medium borderline
BOERETT00058907 Flavonoid IFS medium borderline
BOERETT00059486 Flavonoid IFS low borderline
BOERETT00060797 Flavonoid IFS low borderline
BOERETT00015612 Flavonoid PAL high pass
BOERETT00023198 Flavonoid PAL low borderline
BOERETT00026473 Flavonoid PAL high pass
BOERETT00053920 Flavonoid PAL high pass
BOERETT00056920 Flavonoid PAL high pass
BOERETT00000608 Flavonoid UFGT medium pass
BOERETT00000798 Flavonoid UFGT medium pass
BOERETT00003606 Flavonoid UFGT medium pass
BOERETT00005640 Flavonoid UFGT high pass
BOERETT00005642 Flavonoid UFGT high pass
BOERETT00005643 Flavonoid UFGT medium pass
BOERETT00005645 Flavonoid UFGT medium pass
BOERETT00005838 Flavonoid UFGT medium pass
BOERETT00008054 Flavonoid UFGT medium pass
BOERETT00009892 Flavonoid UFGT high pass
BOERETT00010652 Flavonoid UFGT medium pass
BOERETT00010826 Flavonoid UFGT low borderline
BOERETT00011016 Flavonoid UFGT medium pass
BOERETT00011358 Flavonoid UFGT high pass
BOERETT00011359 Flavonoid UFGT medium pass
BOERETT00011360 Flavonoid UFGT high pass
BOERETT00011375 Flavonoid UFGT medium pass
BOERETT00011936 Flavonoid UFGT low borderline
BOERETT00013234 Flavonoid UFGT medium pass
BOERETT00013235 Flavonoid UFGT medium pass
BOERETT00013236 Flavonoid UFGT medium pass
BOERETT00013421 Flavonoid UFGT medium pass
BOERETT00013422 Flavonoid UFGT medium pass
BOERETT00013443 Flavonoid UFGT medium pass
BOERETT00013444 Flavonoid UFGT medium pass
BOERETT00016993 Flavonoid UFGT medium pass
BOERETT00017743 Flavonoid UFGT high pass
BOERETT00017747 Flavonoid UFGT medium pass
BOERETT00019156 Flavonoid UFGT medium pass
BOERETT00019867 Flavonoid UFGT high pass
BOERETT00019868 Flavonoid UFGT high pass