PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1602
Candidate Protein Records
1221
Pathway-Level Records
3211
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BOERETT00048020 Flavonoid UFGT medium pass
BOERETT00048024 Flavonoid UFGT medium pass
BOERETT00048027 Flavonoid UFGT high pass
BOERETT00048028 Flavonoid UFGT low borderline
BOERETT00048087 Flavonoid UFGT medium pass
BOERETT00050993 Flavonoid UFGT high pass
BOERETT00053929 Flavonoid UFGT medium pass
BOERETT00053954 Flavonoid UFGT medium pass
BOERETT00053955 Flavonoid UFGT medium pass
BOERETT00053961 Flavonoid UFGT medium pass
BOERETT00054331 Flavonoid UFGT medium pass
BOERETT00055700 Flavonoid UFGT medium pass
BOERETT00055909 Flavonoid UFGT medium pass
BOERETT00055910 Flavonoid UFGT medium pass
BOERETT00055913 Flavonoid UFGT high pass
BOERETT00055971 Flavonoid UFGT medium pass
BOERETT00055985 Flavonoid UFGT medium pass
BOERETT00057503 Flavonoid UFGT high pass
BOERETT00059021 Flavonoid UFGT medium pass
BOERETT00059176 Flavonoid UFGT medium pass
BOERETT00059611 Flavonoid UFGT medium pass
BOERETT00061669 Flavonoid UFGT high pass
BOERETT00002355 Phenylpropanoid 4CL medium pass
BOERETT00002357 Phenylpropanoid 4CL medium pass
BOERETT00002391 Phenylpropanoid 4CL medium pass
BOERETT00002392 Phenylpropanoid 4CL low borderline
BOERETT00003698 Phenylpropanoid 4CL low borderline
BOERETT00003742 Phenylpropanoid 4CL medium pass
BOERETT00005402 Phenylpropanoid 4CL medium pass
BOERETT00005404 Phenylpropanoid 4CL medium pass
BOERETT00005405 Phenylpropanoid 4CL medium pass
BOERETT00005406 Phenylpropanoid 4CL medium pass
BOERETT00005411 Phenylpropanoid 4CL low borderline
BOERETT00005529 Phenylpropanoid 4CL medium pass
BOERETT00008373 Phenylpropanoid 4CL medium pass
BOERETT00014492 Phenylpropanoid 4CL medium pass
BOERETT00015105 Phenylpropanoid 4CL low borderline
BOERETT00018282 Phenylpropanoid 4CL low borderline
BOERETT00019817 Phenylpropanoid 4CL medium pass
BOERETT00019924 Phenylpropanoid 4CL low borderline
BOERETT00025767 Phenylpropanoid 4CL low borderline
BOERETT00025768 Phenylpropanoid 4CL low borderline
BOERETT00030171 Phenylpropanoid 4CL low borderline
BOERETT00032358 Phenylpropanoid 4CL low borderline
BOERETT00032751 Phenylpropanoid 4CL medium pass
BOERETT00034058 Phenylpropanoid 4CL medium pass
BOERETT00036225 Phenylpropanoid 4CL medium pass
BOERETT00036848 Phenylpropanoid 4CL low borderline
BOERETT00037094 Phenylpropanoid 4CL low borderline
BOERETT00038096 Phenylpropanoid 4CL low borderline