PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1221
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
BOERETT00021587 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00021588 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00023250 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00023326 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00023365 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00023506 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00023507 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00023644 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00023684 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00023851 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00023897 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00023941 Phenylpropanoid C3'H/CYP98A high pass
BOERETT00024357 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00025803 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00025805 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00025839 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00025923 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00025968 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00025969 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00025972 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00025973 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00025974 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00025975 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00025979 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00025983 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00026338 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00026455 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00026475 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00026853 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00026900 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00026903 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00026906 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00026907 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00026908 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00026909 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00026910 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00027537 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00028522 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00028524 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00028525 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00028529 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00028532 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00028535 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00028537 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00028538 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00028539 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00028540 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00028544 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00028545 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00028546 Phenylpropanoid C3'H/CYP98A medium borderline