PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1602
Candidate Protein Records
1221
Pathway-Level Records
3211
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
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Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BOERETT00010803 Rosmarinic Acid C4H low borderline
BOERETT00011090 Rosmarinic Acid C4H low borderline
BOERETT00011341 Rosmarinic Acid C4H low borderline
BOERETT00011472 Rosmarinic Acid C4H low borderline
BOERETT00011935 Rosmarinic Acid C4H low borderline
BOERETT00012349 Rosmarinic Acid C4H low borderline
BOERETT00012438 Rosmarinic Acid C4H low borderline
BOERETT00012440 Rosmarinic Acid C4H low borderline
BOERETT00012443 Rosmarinic Acid C4H low borderline
BOERETT00012444 Rosmarinic Acid C4H medium pass
BOERETT00012447 Rosmarinic Acid C4H medium pass
BOERETT00012448 Rosmarinic Acid C4H low borderline
BOERETT00012652 Rosmarinic Acid C4H low borderline
BOERETT00013491 Rosmarinic Acid C4H low borderline
BOERETT00013707 Rosmarinic Acid C4H low borderline
BOERETT00013821 Rosmarinic Acid C4H low borderline
BOERETT00015655 Rosmarinic Acid C4H low borderline
BOERETT00015656 Rosmarinic Acid C4H low borderline
BOERETT00016465 Rosmarinic Acid C4H low borderline
BOERETT00017138 Rosmarinic Acid C4H low borderline
BOERETT00017459 Rosmarinic Acid C4H low borderline
BOERETT00017584 Rosmarinic Acid C4H low borderline
BOERETT00017596 Rosmarinic Acid C4H medium pass
BOERETT00017599 Rosmarinic Acid C4H medium pass
BOERETT00017602 Rosmarinic Acid C4H medium pass
BOERETT00017605 Rosmarinic Acid C4H medium pass
BOERETT00017608 Rosmarinic Acid C4H medium pass
BOERETT00017613 Rosmarinic Acid C4H low borderline
BOERETT00017636 Rosmarinic Acid C4H low borderline
BOERETT00017700 Rosmarinic Acid C4H low borderline
BOERETT00019136 Rosmarinic Acid C4H low borderline
BOERETT00019145 Rosmarinic Acid C4H low borderline
BOERETT00020156 Rosmarinic Acid C4H low borderline
BOERETT00020157 Rosmarinic Acid C4H low borderline
BOERETT00020296 Rosmarinic Acid C4H low borderline
BOERETT00020902 Rosmarinic Acid C4H low borderline
BOERETT00021396 Rosmarinic Acid C4H low borderline
BOERETT00021588 Rosmarinic Acid C4H medium pass
BOERETT00023250 Rosmarinic Acid C4H low borderline
BOERETT00023326 Rosmarinic Acid C4H low borderline
BOERETT00023365 Rosmarinic Acid C4H low borderline
BOERETT00023506 Rosmarinic Acid C4H low borderline
BOERETT00023507 Rosmarinic Acid C4H low borderline
BOERETT00023644 Rosmarinic Acid C4H low borderline
BOERETT00023851 Rosmarinic Acid C4H medium pass
BOERETT00023941 Rosmarinic Acid C4H low borderline
BOERETT00025556 Rosmarinic Acid C4H low borderline
BOERETT00025803 Rosmarinic Acid C4H low borderline
BOERETT00025805 Rosmarinic Acid C4H low borderline
BOERETT00025839 Rosmarinic Acid C4H low borderline