PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1602
Candidate Protein Records
1221
Pathway-Level Records
3211
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BOERETT00057340 Steroid CPI1 high pass
BOERETT00012637 Steroid CYP51G1 medium borderline
BOERETT00026853 Steroid CYP51G1 medium borderline
BOERETT00027537 Steroid CYP51G1 medium borderline
BOERETT00034137 Steroid CYP51G1 medium borderline
BOERETT00034138 Steroid CYP51G1 medium borderline
BOERETT00034140 Steroid CYP51G1 medium borderline
BOERETT00043927 Steroid CYP51G1 medium borderline
BOERETT00043928 Steroid CYP51G1 medium borderline
BOERETT00044987 Steroid CYP51G1 medium borderline
BOERETT00056116 Steroid CYP51G1 medium borderline
BOERETT00056121 Steroid CYP51G1 medium borderline
BOERETT00056122 Steroid CYP51G1 medium borderline
BOERETT00058123 Steroid CYP51G1 medium borderline
BOERETT00005303 Steroid CYP90D1 medium borderline
BOERETT00005867 Steroid CYP90D1 low borderline
BOERETT00006332 Steroid CYP90D1 low borderline
BOERETT00010673 Steroid CYP90D1 medium borderline
BOERETT00010803 Steroid CYP90D1 low borderline
BOERETT00011935 Steroid CYP90D1 low borderline
BOERETT00020296 Steroid CYP90D1 medium borderline
BOERETT00023365 Steroid CYP90D1 medium borderline
BOERETT00023506 Steroid CYP90D1 low borderline
BOERETT00023507 Steroid CYP90D1 low borderline
BOERETT00025803 Steroid CYP90D1 low borderline
BOERETT00029203 Steroid CYP90D1 medium borderline
BOERETT00034302 Steroid CYP90D1 medium borderline
BOERETT00039124 Steroid CYP90D1 low borderline
BOERETT00039529 Steroid CYP90D1 low borderline
BOERETT00042185 Steroid CYP90D1 medium borderline
BOERETT00043596 Steroid CYP90D1 low borderline
BOERETT00044411 Steroid CYP90D1 low borderline
BOERETT00044468 Steroid CYP90D1 low borderline
BOERETT00045826 Steroid CYP90D1 low borderline
BOERETT00057673 Steroid CYP90D1 low borderline
BOERETT00037847 Steroid DET2 low borderline
BOERETT00038582 Steroid DET2 low borderline
BOERETT00052278 Steroid DET2 low borderline
BOERETT00053760 Steroid DET2 medium pass
BOERETT00061776 Steroid DET2 low borderline
BOERETT00029347 Steroid DWF1 low borderline
BOERETT00049741 Steroid DWF1 medium pass
BOERETT00003582 Steroid DWF4/CYP90B1 medium borderline
BOERETT00008663 Steroid DWF4/CYP90B1 low borderline
BOERETT00008810 Steroid DWF4/CYP90B1 low borderline
BOERETT00009261 Steroid DWF4/CYP90B1 low borderline
BOERETT00009816 Steroid DWF4/CYP90B1 medium borderline
BOERETT00009990 Steroid DWF4/CYP90B1 low borderline
BOERETT00010646 Steroid DWF4/CYP90B1 medium borderline
BOERETT00010648 Steroid DWF4/CYP90B1 medium borderline