PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1221
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
BOERETT00043596 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00043927 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00043928 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00044045 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00044411 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00044413 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00044468 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00044495 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00044987 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00044997 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00045104 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00045105 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00045107 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00045108 Phenylpropanoid C3'H/CYP98A high pass
BOERETT00045109 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00045110 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00045113 Phenylpropanoid C3'H/CYP98A high pass
BOERETT00045114 Phenylpropanoid C3'H/CYP98A high pass
BOERETT00045117 Phenylpropanoid C3'H/CYP98A medium pass
BOERETT00045826 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00047389 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00047606 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00049490 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00049617 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00050112 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00051265 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00054272 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00055804 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00055822 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00056051 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00056116 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00056121 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00056122 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00058815 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00058890 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00058906 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00058907 Phenylpropanoid C3'H/CYP98A medium borderline
BOERETT00058979 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00059486 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00059788 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00060797 Phenylpropanoid C3'H/CYP98A low borderline
BOERETT00005303 Phenylpropanoid C4H/CYP73A medium borderline
BOERETT00010648 Phenylpropanoid C4H/CYP73A low borderline
BOERETT00017700 Phenylpropanoid C4H/CYP73A low borderline
BOERETT00054271 Phenylpropanoid C4H/CYP73A low borderline
BOERETT00000121 Phenylpropanoid CAD low borderline
BOERETT00000125 Phenylpropanoid CAD medium borderline
BOERETT00003471 Phenylpropanoid CAD low borderline
BOERETT00003755 Phenylpropanoid CAD low borderline
BOERETT00005805 Phenylpropanoid CAD low borderline