PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1602
Candidate Protein Records
1221
Pathway-Level Records
3211
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BOERETT00061854 Steroid SMT1/SMT2/SMT3 low borderline
BOERETT00010946 Steroid SQE medium pass
BOERETT00021502 Steroid SQE medium pass
BOERETT00033404 Steroid SQE medium pass
BOERETT00043978 Steroid SQE medium pass
BOERETT00060620 Steroid SQE medium pass
BOERETT00060624 Steroid SQE medium pass
BOERETT00060626 Steroid SQE medium pass
BOERETT00060628 Steroid SQE medium pass
BOERETT00017335 Steroid SQS/FDFT1 low borderline
BOERETT00032711 Steroid SQS/FDFT1 low borderline
BOERETT00044803 Steroid SQS/FDFT1 high pass
BOERETT00044804 Steroid SQS/FDFT1 high pass
BOERETT00061588 Steroid SQS/FDFT1 medium pass
BOERETT00008014 Terpenoid AACT medium borderline
BOERETT00013541 Terpenoid AACT medium borderline
BOERETT00052142 Terpenoid AACT medium borderline
BOERETT00054437 Terpenoid AACT medium borderline
BOERETT00056269 Terpenoid AACT low borderline
BOERETT00057739 Terpenoid AACT medium borderline
BOERETT00000475 Terpenoid BAHD medium pass
BOERETT00000498 Terpenoid BAHD medium pass
BOERETT00000574 Terpenoid BAHD medium pass
BOERETT00000699 Terpenoid BAHD medium pass
BOERETT00000839 Terpenoid BAHD medium pass
BOERETT00003422 Terpenoid BAHD medium pass
BOERETT00003520 Terpenoid BAHD medium pass
BOERETT00003559 Terpenoid BAHD medium pass
BOERETT00006147 Terpenoid BAHD medium pass
BOERETT00006189 Terpenoid BAHD low borderline
BOERETT00006201 Terpenoid BAHD medium pass
BOERETT00006269 Terpenoid BAHD low borderline
BOERETT00006359 Terpenoid BAHD medium pass
BOERETT00007963 Terpenoid BAHD low borderline
BOERETT00009249 Terpenoid BAHD medium pass
BOERETT00009655 Terpenoid BAHD low borderline
BOERETT00009657 Terpenoid BAHD medium pass
BOERETT00009811 Terpenoid BAHD medium pass
BOERETT00010043 Terpenoid BAHD medium pass
BOERETT00010642 Terpenoid BAHD medium pass
BOERETT00010680 Terpenoid BAHD medium pass
BOERETT00011333 Terpenoid BAHD medium pass
BOERETT00011882 Terpenoid BAHD low borderline
BOERETT00012507 Terpenoid BAHD medium pass
BOERETT00012736 Terpenoid BAHD medium pass
BOERETT00013316 Terpenoid BAHD medium pass
BOERETT00013836 Terpenoid BAHD medium pass
BOERETT00014425 Terpenoid BAHD medium pass
BOERETT00014426 Terpenoid BAHD medium pass
BOERETT00014640 Terpenoid BAHD medium pass