PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1602
Candidate Protein Records
1221
Pathway-Level Records
3211
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BOERETT00050759 Flavonoid F3H low borderline
BOERETT00053741 Flavonoid F3H medium borderline
BOERETT00053969 Flavonoid F3H medium borderline
BOERETT00056136 Flavonoid F3H medium borderline
BOERETT00056464 Flavonoid F3H medium borderline
BOERETT00056792 Flavonoid F3H low borderline
BOERETT00058052 Flavonoid F3H medium borderline
BOERETT00058159 Flavonoid F3H low borderline
BOERETT00061108 Flavonoid F3H medium borderline
BOERETT00035643 Flavonoid FLS medium borderline
BOERETT00036256 Flavonoid FLS medium borderline
BOERETT00009737 Flavonoid FNS low borderline
BOERETT00012637 Flavonoid FNS medium borderline
BOERETT00016453 Flavonoid FNS low borderline
BOERETT00016465 Flavonoid FNS medium borderline
BOERETT00021587 Flavonoid FNS medium borderline
BOERETT00023506 Flavonoid FNS medium borderline
BOERETT00023941 Flavonoid FNS medium borderline
BOERETT00026338 Flavonoid FNS medium borderline
BOERETT00026900 Flavonoid FNS medium borderline
BOERETT00026903 Flavonoid FNS medium borderline
BOERETT00028882 Flavonoid FNS medium borderline
BOERETT00034140 Flavonoid FNS medium borderline
BOERETT00037908 Flavonoid FNS medium borderline
BOERETT00039529 Flavonoid FNS medium borderline
BOERETT00040706 Flavonoid FNS low borderline
BOERETT00040716 Flavonoid FNS low borderline
BOERETT00040718 Flavonoid FNS low borderline
BOERETT00041287 Flavonoid FNS medium borderline
BOERETT00041851 Flavonoid FNS low borderline
BOERETT00043282 Flavonoid FNS medium borderline
BOERETT00044413 Flavonoid FNS medium borderline
BOERETT00045826 Flavonoid FNS medium borderline
BOERETT00057673 Flavonoid FNS medium borderline
BOERETT00059788 Flavonoid FNS medium borderline
BOERETT00000681 Flavonoid IFR low borderline
BOERETT00004080 Flavonoid IFR low borderline
BOERETT00005297 Flavonoid IFR high pass
BOERETT00010081 Flavonoid IFR medium pass
BOERETT00010083 Flavonoid IFR high pass
BOERETT00010084 Flavonoid IFR high pass
BOERETT00010085 Flavonoid IFR high pass
BOERETT00012489 Flavonoid IFR low borderline
BOERETT00012976 Flavonoid IFR low borderline
BOERETT00022378 Flavonoid IFR low borderline
BOERETT00022966 Flavonoid IFR low borderline
BOERETT00023952 Flavonoid IFR low borderline
BOERETT00025714 Flavonoid IFR low borderline
BOERETT00026268 Flavonoid IFR low borderline
BOERETT00026876 Flavonoid IFR high pass