PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1602
Candidate Protein Records
1221
Pathway-Level Records
3211
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
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Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BOERETT00054195 Terpenoid MCT/IspD low borderline
BOERETT00022728 Terpenoid MDS/IspF high pass
BOERETT00041702 Terpenoid MDS/IspF low borderline
BOERETT00048237 Terpenoid MDS/IspF low borderline
BOERETT00048240 Terpenoid MDS/IspF low borderline
BOERETT00048258 Terpenoid MDS/IspF low borderline
BOERETT00048408 Terpenoid MDS/IspF low borderline
BOERETT00023269 Terpenoid MVD low borderline
BOERETT00026591 Terpenoid MVD medium pass
BOERETT00037696 Terpenoid MVD low borderline
BOERETT00053668 Terpenoid MVD medium pass
BOERETT00015196 Terpenoid MVK low borderline
BOERETT00018313 Terpenoid MVK medium pass
BOERETT00041712 Terpenoid MVK low borderline
BOERETT00044182 Terpenoid MVK low borderline
BOERETT00009947 Terpenoid PMK low borderline
BOERETT00010348 Terpenoid PMK low borderline
BOERETT00014575 Terpenoid PMK low borderline
BOERETT00014580 Terpenoid PMK low borderline
BOERETT00037894 Terpenoid PMK medium pass
BOERETT00000121 Terpenoid TPS medium pass
BOERETT00001703 Terpenoid TPS medium pass
BOERETT00001704 Terpenoid TPS medium pass
BOERETT00003471 Terpenoid TPS medium pass
BOERETT00008050 Terpenoid TPS medium pass
BOERETT00017148 Terpenoid TPS medium pass
BOERETT00017150 Terpenoid TPS medium pass
BOERETT00017160 Terpenoid TPS low borderline
BOERETT00017164 Terpenoid TPS low borderline
BOERETT00017165 Terpenoid TPS medium pass
BOERETT00017174 Terpenoid TPS low borderline
BOERETT00017176 Terpenoid TPS medium pass
BOERETT00017177 Terpenoid TPS medium pass
BOERETT00020174 Terpenoid TPS medium pass
BOERETT00028479 Terpenoid TPS medium pass
BOERETT00030299 Terpenoid TPS medium pass
BOERETT00030414 Terpenoid TPS medium pass
BOERETT00034045 Terpenoid TPS medium pass
BOERETT00035989 Terpenoid TPS medium pass
BOERETT00036802 Terpenoid TPS medium pass
BOERETT00036803 Terpenoid TPS low borderline
BOERETT00041635 Terpenoid TPS medium pass
BOERETT00042313 Terpenoid TPS medium pass
BOERETT00042316 Terpenoid TPS low borderline
BOERETT00048893 Terpenoid TPS medium pass
BOERETT00056715 Terpenoid TPS medium pass
BOERETT00057664 Terpenoid TPS medium pass
BOERETT00060656 Terpenoid TPS medium pass
BOERETT00060660 Terpenoid TPS medium pass
BOERETT00000608 Terpenoid UGT medium pass