PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1221
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
BOERETT00046823 Phenylpropanoid CCR medium borderline
BOERETT00054375 Phenylpropanoid CCR medium borderline
BOERETT00061338 Phenylpropanoid CCR low borderline
BOERETT00006113 Phenylpropanoid CCoAOMT medium pass
BOERETT00008940 Phenylpropanoid CCoAOMT medium pass
BOERETT00008943 Phenylpropanoid CCoAOMT medium pass
BOERETT00013693 Phenylpropanoid CCoAOMT medium pass
BOERETT00013695 Phenylpropanoid CCoAOMT medium pass
BOERETT00044716 Phenylpropanoid CCoAOMT medium pass
BOERETT00045635 Phenylpropanoid CCoAOMT medium pass
BOERETT00003712 Phenylpropanoid COMT medium pass
BOERETT00005467 Phenylpropanoid COMT medium pass
BOERETT00005468 Phenylpropanoid COMT medium pass
BOERETT00005469 Phenylpropanoid COMT medium pass
BOERETT00010293 Phenylpropanoid COMT medium pass
BOERETT00017638 Phenylpropanoid COMT medium pass
BOERETT00022181 Phenylpropanoid COMT medium pass
BOERETT00026456 Phenylpropanoid COMT medium pass
BOERETT00032781 Phenylpropanoid COMT medium pass
BOERETT00033881 Phenylpropanoid COMT low borderline
BOERETT00034985 Phenylpropanoid COMT low borderline
BOERETT00035029 Phenylpropanoid COMT medium pass
BOERETT00035038 Phenylpropanoid COMT medium pass
BOERETT00035757 Phenylpropanoid COMT medium pass
BOERETT00044434 Phenylpropanoid COMT medium pass
BOERETT00044435 Phenylpropanoid COMT medium pass
BOERETT00044854 Phenylpropanoid COMT medium pass
BOERETT00044857 Phenylpropanoid COMT medium pass
BOERETT00044861 Phenylpropanoid COMT low borderline
BOERETT00044867 Phenylpropanoid COMT low borderline
BOERETT00045819 Phenylpropanoid COMT medium pass
BOERETT00045836 Phenylpropanoid COMT medium pass
BOERETT00049763 Phenylpropanoid COMT low borderline
BOERETT00054672 Phenylpropanoid COMT low borderline
BOERETT00057433 Phenylpropanoid COMT medium pass
BOERETT00003721 Phenylpropanoid CSE medium pass
BOERETT00005442 Phenylpropanoid CSE medium pass
BOERETT00006571 Phenylpropanoid CSE medium pass
BOERETT00008518 Phenylpropanoid CSE medium pass
BOERETT00012735 Phenylpropanoid CSE medium pass
BOERETT00012909 Phenylpropanoid CSE medium pass
BOERETT00013341 Phenylpropanoid CSE medium pass
BOERETT00013597 Phenylpropanoid CSE medium pass
BOERETT00020816 Phenylpropanoid CSE medium pass
BOERETT00024062 Phenylpropanoid CSE medium pass
BOERETT00025720 Phenylpropanoid CSE medium pass
BOERETT00026861 Phenylpropanoid CSE medium pass
BOERETT00029086 Phenylpropanoid CSE medium pass
BOERETT00029087 Phenylpropanoid CSE medium pass
BOERETT00029256 Phenylpropanoid CSE medium pass