PlantSME Plant secondary metabolism enzyme database

Boechera retrofracta (boechera_retrofracta)

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Imported from atlas release summary for Boechera retrofracta.

1602
Candidate Protein Records
1221
Pathway-Level Records
3211
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 372 19 BAHD (158) View species results
Alkaloid pathway 272 19 SGD (46) View species results
Phenylpropanoid pathway 257 11 POD (121) View species results
Flavonoid pathway 143 8 UFGT (95) View species results
Rosmarinic acid pathway 97 7 C4H (43) View species results
Steroid pathway 80 13 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1239 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 244 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BOERETT00029188 Alkaloid LAMT medium borderline
BOERETT00029190 Alkaloid LAMT medium borderline
BOERETT00030411 Alkaloid LAMT medium borderline
BOERETT00035202 Alkaloid LAMT medium borderline
BOERETT00035347 Alkaloid LAMT low borderline
BOERETT00036696 Alkaloid LAMT medium borderline
BOERETT00037508 Alkaloid LAMT medium borderline
BOERETT00045009 Alkaloid LAMT medium borderline
BOERETT00045660 Alkaloid LAMT low borderline
BOERETT00006073 Alkaloid MPO medium pass
BOERETT00032720 Alkaloid MPO medium pass
BOERETT00037929 Alkaloid MPO medium pass
BOERETT00037930 Alkaloid MPO low borderline
BOERETT00038511 Alkaloid MPO medium pass
BOERETT00047635 Alkaloid MPO high pass
BOERETT00059226 Alkaloid MPO medium pass
BOERETT00004157 Alkaloid NCS medium borderline
BOERETT00012421 Alkaloid NCS medium borderline
BOERETT00013308 Alkaloid NCS medium borderline
BOERETT00019060 Alkaloid NCS medium borderline
BOERETT00027790 Alkaloid NCS medium borderline
BOERETT00034361 Alkaloid NCS medium borderline
BOERETT00035643 Alkaloid NCS medium borderline
BOERETT00038217 Alkaloid NCS medium borderline
BOERETT00042408 Alkaloid NCS medium borderline
BOERETT00049354 Alkaloid NCS medium borderline
BOERETT00050759 Alkaloid NCS medium borderline
BOERETT00000456 Alkaloid NMT medium pass
BOERETT00000859 Alkaloid NMT low borderline
BOERETT00001750 Alkaloid NMT low borderline
BOERETT00003412 Alkaloid NMT medium pass
BOERETT00003736 Alkaloid NMT medium pass
BOERETT00004884 Alkaloid NMT medium pass
BOERETT00004888 Alkaloid NMT low borderline
BOERETT00005387 Alkaloid NMT medium borderline
BOERETT00006117 Alkaloid NMT low borderline
BOERETT00007949 Alkaloid NMT medium pass
BOERETT00007950 Alkaloid NMT low borderline
BOERETT00008011 Alkaloid NMT low borderline
BOERETT00009785 Alkaloid NMT medium pass
BOERETT00009852 Alkaloid NMT medium borderline
BOERETT00010201 Alkaloid NMT medium borderline
BOERETT00010283 Alkaloid NMT medium pass
BOERETT00010293 Alkaloid NMT medium borderline
BOERETT00010666 Alkaloid NMT medium pass
BOERETT00010903 Alkaloid NMT medium pass
BOERETT00011025 Alkaloid NMT low borderline
BOERETT00011072 Alkaloid NMT medium pass
BOERETT00012314 Alkaloid NMT medium pass
BOERETT00013402 Alkaloid NMT medium pass