PlantSME Plant secondary metabolism enzyme database

Brassica rapa (brassica_rapa)

Imported from atlas release summary for Brassica rapa.

2396
Candidate Protein Records
1938
Pathway-Level Records
4856
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 598 20 BAHD (263) View species results
Alkaloid pathway 432 17 7DLGT (75) View species results
Phenylpropanoid pathway 407 11 POD (183) View species results
Flavonoid pathway 231 11 UFGT (148) View species results
Rosmarinic acid pathway 154 7 C4H (63) View species results
Steroid pathway 116 13 SMT1/SMT2/SMT3 (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1919 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 380 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bra009142.1-P Terpenoid UGT medium pass
Bra009143.1-P Terpenoid UGT medium pass
Bra009144.1-P Terpenoid UGT medium pass
Bra009145.1-P Terpenoid UGT medium pass
Bra009146.1-P Terpenoid UGT medium pass
Bra009147.1-P Terpenoid UGT medium pass
Bra010190.1-P Terpenoid UGT medium pass
Bra011490.1-P Terpenoid UGT medium pass
Bra011492.1-P Terpenoid UGT medium pass
Bra011493.1-P Terpenoid UGT medium pass
Bra011495.1-P Terpenoid UGT medium pass
Bra011496.1-P Terpenoid UGT medium pass
Bra011705.1-P Terpenoid UGT medium pass
Bra012092.1-P Terpenoid UGT medium pass
Bra012322.1-P Terpenoid UGT medium pass
Bra012323.1-P Terpenoid UGT medium pass
Bra012324.1-P Terpenoid UGT medium pass
Bra012780.1-P Terpenoid UGT medium pass
Bra012784.1-P Terpenoid UGT medium pass
Bra012795.1-P Terpenoid UGT medium pass
Bra012892.1-P Terpenoid UGT medium pass
Bra012893.1-P Terpenoid UGT medium pass
Bra013043.1-P Terpenoid UGT medium pass
Bra013105.1-P Terpenoid UGT medium pass
Bra014225.1-P Terpenoid UGT medium pass
Bra014275.1-P Terpenoid UGT medium pass
Bra015219.1-P Terpenoid UGT medium pass
Bra015435.1-P Terpenoid UGT medium pass
Bra015448.1-P Terpenoid UGT medium pass
Bra015462.1-P Terpenoid UGT low borderline
Bra015567.1-P Terpenoid UGT medium pass
Bra015568.1-P Terpenoid UGT medium pass
Bra016382.1-P Terpenoid UGT medium pass
Bra016424.1-P Terpenoid UGT medium pass
Bra017224.1-P Terpenoid UGT medium pass
Bra017225.1-P Terpenoid UGT medium pass
Bra017381.1-P Terpenoid UGT low borderline
Bra017463.1-P Terpenoid UGT medium pass
Bra017882.1-P Terpenoid UGT medium pass
Bra018200.1-P Terpenoid UGT medium pass
Bra018201.1-P Terpenoid UGT medium pass
Bra018202.1-P Terpenoid UGT medium pass
Bra018203.1-P Terpenoid UGT medium pass
Bra018333.1-P Terpenoid UGT medium pass
Bra018334.1-P Terpenoid UGT low borderline
Bra018363.1-P Terpenoid UGT medium pass
Bra018364.1-P Terpenoid UGT medium pass
Bra018440.1-P Terpenoid UGT medium pass
Bra018792.1-P Terpenoid UGT medium pass
Bra018793.1-P Terpenoid UGT medium pass