PlantSME Plant secondary metabolism enzyme database

Brassica rapa (brassica_rapa)

Imported from atlas release summary for Brassica rapa.

2396
Candidate Protein Records
1938
Pathway-Level Records
4856
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 598 20 BAHD (263) View species results
Alkaloid pathway 432 17 7DLGT (75) View species results
Phenylpropanoid pathway 407 11 POD (183) View species results
Flavonoid pathway 231 11 UFGT (148) View species results
Rosmarinic acid pathway 154 7 C4H (63) View species results
Steroid pathway 116 13 SMT1/SMT2/SMT3 (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1919 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 380 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bra018809.1-P Terpenoid UGT low borderline
Bra018901.1-P Terpenoid UGT medium pass
Bra019684.1-P Terpenoid UGT low borderline
Bra020310.1-P Terpenoid UGT medium pass
Bra021740.1-P Terpenoid UGT medium pass
Bra021743.1-P Terpenoid UGT medium pass
Bra021887.1-P Terpenoid UGT medium pass
Bra022165.1-P Terpenoid UGT medium pass
Bra022688.1-P Terpenoid UGT medium pass
Bra022689.1-P Terpenoid UGT medium pass
Bra022781.1-P Terpenoid UGT medium pass
Bra022864.1-P Terpenoid UGT medium pass
Bra023079.1-P Terpenoid UGT medium pass
Bra023080.1-P Terpenoid UGT medium pass
Bra023081.1-P Terpenoid UGT medium pass
Bra023594.1-P Terpenoid UGT medium pass
Bra023841.1-P Terpenoid UGT medium pass
Bra023861.1-P Terpenoid UGT medium pass
Bra023863.1-P Terpenoid UGT medium pass
Bra023872.1-P Terpenoid UGT medium pass
Bra024461.1-P Terpenoid UGT medium pass
Bra024634.1-P Terpenoid UGT medium pass
Bra026039.1-P Terpenoid UGT medium pass
Bra026546.1-P Terpenoid UGT medium pass
Bra026714.1-P Terpenoid UGT medium pass
Bra028098.1-P Terpenoid UGT medium pass
Bra029045.1-P Terpenoid UGT medium pass
Bra029046.1-P Terpenoid UGT medium pass
Bra029047.1-P Terpenoid UGT medium pass
Bra029049.1-P Terpenoid UGT medium pass
Bra030620.1-P Terpenoid UGT medium pass
Bra031102.1-P Terpenoid UGT medium pass
Bra031290.1-P Terpenoid UGT medium pass
Bra031303.1-P Terpenoid UGT medium pass
Bra031304.1-P Terpenoid UGT medium pass
Bra031306.1-P Terpenoid UGT medium pass
Bra031307.1-P Terpenoid UGT medium pass
Bra031310.1-P Terpenoid UGT medium pass
Bra031311.1-P Terpenoid UGT medium pass
Bra031340.1-P Terpenoid UGT low borderline
Bra031343.1-P Terpenoid UGT medium pass
Bra031386.1-P Terpenoid UGT medium pass
Bra031387.1-P Terpenoid UGT medium pass
Bra031388.1-P Terpenoid UGT medium pass
Bra031483.1-P Terpenoid UGT medium pass
Bra031559.1-P Terpenoid UGT medium pass
Bra031561.1-P Terpenoid UGT low borderline
Bra032179.1-P Terpenoid UGT medium pass
Bra033266.1-P Terpenoid UGT medium pass
Bra033417.1-P Terpenoid UGT medium pass