PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status
Ctin01G0000410.1 Flavonoid 4CL low borderline
Ctin01G0000410.2 Flavonoid 4CL low borderline
Ctin01G0000410.3 Flavonoid 4CL low borderline
Ctin01G0000410.4 Flavonoid 4CL low borderline
Ctin01G0006460.1 Flavonoid 4CL medium pass
Ctin01G0006460.2 Flavonoid 4CL medium pass
Ctin01G0006490.1 Flavonoid 4CL medium pass
Ctin01G0006500.1 Flavonoid 4CL medium pass
Ctin01G0007120.1 Flavonoid 4CL medium pass
Ctin01G0007140.1 Flavonoid 4CL medium pass
Ctin01G0019790.1 Flavonoid 4CL low borderline
Ctin01G0019790.3 Flavonoid 4CL low borderline
Ctin01G0019790.4 Flavonoid 4CL low borderline
Ctin01G0019790.5 Flavonoid 4CL low borderline
Ctin01G0019790.7 Flavonoid 4CL low borderline
Ctin03G0004740.1 Flavonoid 4CL low borderline
Ctin03G0024660.1 Flavonoid 4CL medium pass
Ctin03G0027030.1 Flavonoid 4CL medium pass
Ctin04G0006410.1 Flavonoid 4CL low borderline
Ctin05G0005730.1 Flavonoid 4CL low borderline
Ctin05G0005730.2 Flavonoid 4CL low borderline
Ctin05G0005730.3 Flavonoid 4CL low borderline
Ctin05G0005730.4 Flavonoid 4CL low borderline
Ctin05G0009950.1 Flavonoid 4CL low borderline
Ctin06G0001150.1 Flavonoid 4CL medium pass
Ctin06G0002510.1 Flavonoid 4CL medium pass
Ctin06G0002520.1 Flavonoid 4CL medium pass
Ctin06G0002680.1 Flavonoid 4CL medium pass
Ctin06G0007250.1 Flavonoid 4CL low borderline
Ctin06G0007250.2 Flavonoid 4CL low borderline
Ctin06G0007250.3 Flavonoid 4CL low borderline
Ctin06G0007250.4 Flavonoid 4CL low borderline
Ctin06G0030500.1 Flavonoid 4CL low borderline
Ctin06G0030500.2 Flavonoid 4CL low borderline
Ctin06G0030510.1 Flavonoid 4CL low borderline
Ctin06G0030510.4 Flavonoid 4CL low borderline
Ctin07G0000120.1 Flavonoid 4CL medium pass
Ctin07G0000390.1 Flavonoid 4CL medium pass
Ctin07G0008130.1 Flavonoid 4CL medium pass
Ctin07G0008550.1 Flavonoid 4CL medium pass
Ctin07G0009690.1 Flavonoid 4CL medium pass
Ctin07G0018300.1 Flavonoid 4CL medium pass
Ctin07G0018940.1 Flavonoid 4CL low borderline
Ctin08G0000030.1 Flavonoid 4CL medium pass
Ctin08G0007500.1 Flavonoid 4CL medium pass
Ctin08G0011640.1 Flavonoid 4CL low borderline
Ctin08G0011640.2 Flavonoid 4CL low borderline
Ctin08G0011640.3 Flavonoid 4CL low borderline
Ctin08G0017720.1 Flavonoid 4CL medium pass
Ctin08G0017730.1 Flavonoid 4CL medium pass