PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
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Gene Pathway Family Confidence Status
Ctin02G0014430.1 Phenylpropanoid HCT medium pass
Ctin02G0014450.1 Phenylpropanoid HCT medium pass
Ctin05G0004060.1 Phenylpropanoid HCT medium pass
Ctin05G0005070.1 Phenylpropanoid HCT medium pass
Ctin05G0008130.1 Phenylpropanoid HCT low borderline
Ctin05G0008420.1 Phenylpropanoid HCT low borderline
Ctin05G0008430.1 Phenylpropanoid HCT low borderline
Ctin05G0021720.1 Phenylpropanoid HCT low borderline
Ctin05G0021730.1 Phenylpropanoid HCT low borderline
Ctin05G0024280.1 Phenylpropanoid HCT medium pass
Ctin05G0026650.1 Phenylpropanoid HCT medium pass
Ctin06G0003590.1 Phenylpropanoid HCT medium pass
Ctin06G0003600.1 Phenylpropanoid HCT low borderline
Ctin06G0003610.1 Phenylpropanoid HCT medium pass
Ctin06G0003630.1 Phenylpropanoid HCT low borderline
Ctin06G0003640.1 Phenylpropanoid HCT low borderline
Ctin06G0003650.1 Phenylpropanoid HCT low borderline
Ctin06G0003660.1 Phenylpropanoid HCT low borderline
Ctin06G0003670.1 Phenylpropanoid HCT low borderline
Ctin06G0007330.1 Phenylpropanoid HCT low borderline
Ctin06G0007330.2 Phenylpropanoid HCT low borderline
Ctin06G0007350.2 Phenylpropanoid HCT low borderline
Ctin06G0027430.1 Phenylpropanoid HCT medium pass
Ctin08G0003630.1 Phenylpropanoid HCT low borderline
Ctin08G0004400.1 Phenylpropanoid HCT low borderline
Ctin08G0023490.1 Phenylpropanoid HCT low borderline
Ctin09G0003430.1 Phenylpropanoid HCT medium pass
Ctin09G0004140.1 Phenylpropanoid HCT medium pass
Ctin09G0012770.1 Phenylpropanoid HCT low borderline
Ctin09G0018400.1 Phenylpropanoid HCT low borderline
Ctin10G0010130.1 Phenylpropanoid HCT low borderline
Ctin10G0026100.1 Phenylpropanoid HCT medium pass
Ctin11G0001490.1 Phenylpropanoid HCT low borderline
Ctin12G0013970.1 Phenylpropanoid HCT medium pass
Ctin12G0019330.1 Phenylpropanoid HCT medium pass