PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Ctin01G0008030.1 Alkaloid GS high pass
Ctin01G0008050.1 Alkaloid GS high pass
Ctin02G0011520.1 Alkaloid GS low borderline
Ctin02G0011520.2 Alkaloid GS low borderline
Ctin03G0008170.1 Alkaloid GS high pass
Ctin03G0008170.2 Alkaloid GS high pass
Ctin04G0004160.1 Alkaloid GS medium pass
Ctin04G0008350.1 Alkaloid GS low borderline
Ctin04G0013310.1 Alkaloid GS low borderline
Ctin04G0018120.1 Alkaloid GS high pass
Ctin05G0012030.1 Alkaloid GS low borderline
Ctin06G0022450.1 Alkaloid GS high pass
Ctin07G0001360.1 Alkaloid GS low borderline
Ctin07G0001360.2 Alkaloid GS low borderline
Ctin07G0012910.1 Alkaloid GS low borderline
Ctin07G0012920.1 Alkaloid GS low borderline
Ctin07G0012950.1 Alkaloid GS low borderline
Ctin07G0012950.2 Alkaloid GS low borderline
Ctin07G0013460.1 Alkaloid GS low borderline
Ctin08G0001380.1 Alkaloid GS medium pass
Ctin08G0001390.1 Alkaloid GS medium pass
Ctin08G0001420.1 Alkaloid GS low borderline
Ctin08G0002210.1 Alkaloid GS low borderline
Ctin08G0002220.1 Alkaloid GS low borderline
Ctin08G0018470.1 Alkaloid GS low borderline
Ctin08G0018470.2 Alkaloid GS medium pass
Ctin08G0018480.1 Alkaloid GS medium pass
Ctin08G0018490.1 Alkaloid GS medium pass
Ctin08G0018500.1 Alkaloid GS high pass
Ctin10G0007450.1 Alkaloid GS low borderline
Ctin10G0024620.1 Alkaloid GS high pass
Ctin11G0003060.1 Alkaloid GS high pass
Ctin12G0017170.1 Alkaloid GS low borderline
Ctin12G0017170.2 Alkaloid GS low borderline
Ctin12G0017170.4 Alkaloid GS low borderline
Ctin12G0020030.1 Alkaloid GS low borderline
Ctin12G0020030.2 Alkaloid GS low borderline