PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
Ctin01G0002640.1 Alkaloid IO medium borderline
Ctin01G0004930.1 Alkaloid IO low borderline
Ctin02G0001020.1 Alkaloid IO medium borderline
Ctin03G0028350.1 Alkaloid IO medium borderline
Ctin03G0028360.1 Alkaloid IO medium borderline
Ctin04G0021140.1 Alkaloid IO high pass
Ctin04G0021200.1 Alkaloid IO medium borderline
Ctin04G0021210.1 Alkaloid IO medium borderline
Ctin04G0025180.1 Alkaloid IO medium borderline
Ctin05G0013920.1 Alkaloid IO medium borderline
Ctin06G0021930.1 Alkaloid IO medium borderline
Ctin06G0022660.1 Alkaloid IO medium borderline
Ctin06G0024010.1 Alkaloid IO medium borderline
Ctin06G0028880.1 Alkaloid IO medium borderline
Ctin06G0029470.1 Alkaloid IO medium borderline
Ctin06G0030200.1 Alkaloid IO medium borderline
Ctin06G0033160.1 Alkaloid IO medium borderline
Ctin07G0003090.1 Alkaloid IO medium borderline
Ctin08G0027620.1 Alkaloid IO medium borderline
Ctin09G0008540.1 Alkaloid IO low borderline
Ctin09G0008620.1 Alkaloid IO medium borderline
Ctin09G0008630.1 Alkaloid IO medium borderline
Ctin09G0008630.2 Alkaloid IO medium borderline
Ctin09G0025460.1 Alkaloid IO low borderline
Ctin09G0028750.1 Alkaloid IO medium pass
Ctin10G0006700.1 Alkaloid IO medium borderline
Ctin10G0023660.1 Alkaloid IO medium borderline
Ctin11G0001120.1 Alkaloid IO high pass
Ctin11G0013540.1 Alkaloid IO medium borderline
Ctin11G0019850.1 Alkaloid IO medium borderline
Ctin12G0014140.1 Alkaloid IO low borderline
Ctin12G0014160.1 Alkaloid IO low borderline
Ctin12G0019320.1 Alkaloid IO medium pass