PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
Ctin01G0001650.1 Flavonoid UFGT medium pass
Ctin01G0001650.2 Flavonoid UFGT medium pass
Ctin01G0001650.3 Flavonoid UFGT medium pass
Ctin01G0001730.1 Flavonoid UFGT medium pass
Ctin01G0001730.2 Flavonoid UFGT medium pass
Ctin02G0004430.1 Flavonoid UFGT medium pass
Ctin02G0009000.1 Flavonoid UFGT medium pass
Ctin02G0011760.1 Flavonoid UFGT medium pass
Ctin02G0011770.1 Flavonoid UFGT medium pass
Ctin02G0013540.1 Flavonoid UFGT medium pass
Ctin03G0005140.1 Flavonoid UFGT low borderline
Ctin03G0005140.2 Flavonoid UFGT low borderline
Ctin03G0009700.1 Flavonoid UFGT high pass
Ctin03G0010410.1 Flavonoid UFGT medium pass
Ctin03G0010430.1 Flavonoid UFGT high pass
Ctin03G0016500.1 Flavonoid UFGT medium pass
Ctin03G0016990.1 Flavonoid UFGT high pass
Ctin03G0019070.1 Flavonoid UFGT medium pass
Ctin03G0019080.1 Flavonoid UFGT medium pass
Ctin03G0019090.2 Flavonoid UFGT medium pass
Ctin03G0019170.1 Flavonoid UFGT high pass
Ctin03G0019190.1 Flavonoid UFGT high pass
Ctin03G0019200.1 Flavonoid UFGT medium pass
Ctin03G0019240.1 Flavonoid UFGT low borderline
Ctin03G0019290.1 Flavonoid UFGT high pass
Ctin03G0019300.1 Flavonoid UFGT low borderline
Ctin03G0019340.1 Flavonoid UFGT medium pass
Ctin03G0019350.1 Flavonoid UFGT medium pass
Ctin03G0022180.1 Flavonoid UFGT medium pass
Ctin03G0022200.1 Flavonoid UFGT medium pass
Ctin03G0022200.2 Flavonoid UFGT medium pass
Ctin03G0022200.3 Flavonoid UFGT medium pass
Ctin03G0022200.4 Flavonoid UFGT medium pass
Ctin03G0030380.1 Flavonoid UFGT low borderline
Ctin03G0030390.1 Flavonoid UFGT medium pass
Ctin03G0030430.1 Flavonoid UFGT medium pass
Ctin04G0000190.1 Flavonoid UFGT medium pass
Ctin04G0001730.1 Flavonoid UFGT medium pass
Ctin04G0011200.1 Flavonoid UFGT low borderline
Ctin04G0011200.2 Flavonoid UFGT low borderline
Ctin04G0018550.1 Flavonoid UFGT low borderline
Ctin05G0009210.1 Flavonoid UFGT medium pass
Ctin05G0009340.1 Flavonoid UFGT high pass
Ctin05G0009350.1 Flavonoid UFGT medium pass
Ctin05G0018140.1 Flavonoid UFGT medium pass
Ctin06G0002260.1 Flavonoid UFGT medium pass
Ctin06G0002280.1 Flavonoid UFGT high pass
Ctin06G0002290.1 Flavonoid UFGT medium pass
Ctin06G0002300.1 Flavonoid UFGT medium pass
Ctin06G0002440.3 Flavonoid UFGT medium pass