PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
Ctin01G0002690.1 Alkaloid T16H medium borderline
Ctin01G0010680.1 Alkaloid T16H medium borderline
Ctin01G0010780.1 Alkaloid T16H medium borderline
Ctin01G0020190.1 Alkaloid T16H medium pass
Ctin02G0007740.1 Alkaloid T16H medium borderline
Ctin03G0002010.2 Alkaloid T16H medium borderline
Ctin05G0009540.1 Alkaloid T16H medium borderline
Ctin06G0024020.1 Alkaloid T16H medium borderline
Ctin06G0027930.1 Alkaloid T16H medium borderline
Ctin06G0027980.1 Alkaloid T16H medium borderline
Ctin06G0028020.2 Alkaloid T16H medium pass
Ctin07G0020850.1 Alkaloid T16H low borderline
Ctin08G0009580.1 Alkaloid T16H medium borderline
Ctin08G0009610.1 Alkaloid T16H medium borderline
Ctin08G0009630.1 Alkaloid T16H medium borderline
Ctin08G0009630.2 Alkaloid T16H medium borderline
Ctin08G0009640.1 Alkaloid T16H medium borderline
Ctin08G0009760.1 Alkaloid T16H medium borderline
Ctin08G0013330.2 Alkaloid T16H medium pass
Ctin09G0004990.1 Alkaloid T16H medium borderline
Ctin09G0007630.1 Alkaloid T16H medium borderline
Ctin09G0008690.2 Alkaloid T16H medium borderline
Ctin09G0008690.3 Alkaloid T16H medium borderline
Ctin09G0012570.1 Alkaloid T16H medium borderline
Ctin09G0012580.1 Alkaloid T16H medium borderline
Ctin09G0012610.1 Alkaloid T16H medium borderline
Ctin09G0012630.1 Alkaloid T16H medium pass
Ctin09G0012630.2 Alkaloid T16H medium pass
Ctin09G0012630.3 Alkaloid T16H medium pass
Ctin09G0017000.1 Alkaloid T16H medium borderline
Ctin09G0017010.1 Alkaloid T16H medium borderline
Ctin09G0017040.1 Alkaloid T16H medium borderline
Ctin09G0018940.1 Alkaloid T16H medium borderline
Ctin09G0020760.1 Alkaloid T16H medium borderline
Ctin09G0025450.1 Alkaloid T16H medium borderline
Ctin09G0025470.1 Alkaloid T16H medium borderline
Ctin09G0026680.1 Alkaloid T16H medium borderline
Ctin11G0003070.1 Alkaloid T16H medium borderline
Ctin11G0022870.1 Alkaloid T16H medium borderline
Ctin12G0010300.1 Alkaloid T16H medium borderline
Ctin12G0022590.1 Alkaloid T16H medium borderline