PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status
Ctin01G0004450.1 Alkaloid SLS medium borderline
Ctin02G0016950.1 Alkaloid SLS medium borderline
Ctin03G0010890.1 Alkaloid SLS medium borderline
Ctin03G0010890.2 Alkaloid SLS medium borderline
Ctin03G0010920.1 Alkaloid SLS medium borderline
Ctin03G0010950.1 Alkaloid SLS medium borderline
Ctin03G0010950.2 Alkaloid SLS medium borderline
Ctin03G0010950.3 Alkaloid SLS medium borderline
Ctin03G0010980.1 Alkaloid SLS medium borderline
Ctin03G0015930.1 Alkaloid SLS medium borderline
Ctin04G0004780.1 Alkaloid SLS medium borderline
Ctin04G0005300.1 Alkaloid SLS medium borderline
Ctin04G0005300.3 Alkaloid SLS medium borderline
Ctin04G0005470.1 Alkaloid SLS medium borderline
Ctin04G0020540.1 Alkaloid SLS medium borderline
Ctin04G0020540.2 Alkaloid SLS medium borderline
Ctin04G0020610.1 Alkaloid SLS medium pass
Ctin04G0020610.2 Alkaloid SLS medium borderline
Ctin04G0021120.1 Alkaloid SLS medium borderline
Ctin04G0021230.1 Alkaloid SLS medium borderline
Ctin04G0021250.1 Alkaloid SLS medium borderline
Ctin05G0002610.1 Alkaloid SLS medium borderline
Ctin05G0011550.1 Alkaloid SLS medium borderline
Ctin06G0002420.1 Alkaloid SLS medium borderline
Ctin06G0002420.3 Alkaloid SLS medium borderline
Ctin06G0004110.1 Alkaloid SLS medium borderline
Ctin06G0017820.1 Alkaloid SLS low borderline
Ctin06G0030380.1 Alkaloid SLS medium borderline
Ctin06G0030390.1 Alkaloid SLS medium borderline
Ctin06G0030390.10 Alkaloid SLS medium borderline
Ctin06G0030390.2 Alkaloid SLS medium borderline
Ctin06G0030390.3 Alkaloid SLS medium borderline
Ctin06G0030390.4 Alkaloid SLS medium borderline
Ctin06G0030390.5 Alkaloid SLS medium borderline
Ctin06G0030390.6 Alkaloid SLS medium borderline
Ctin06G0030390.7 Alkaloid SLS medium borderline
Ctin06G0030390.8 Alkaloid SLS medium borderline
Ctin06G0030390.9 Alkaloid SLS medium borderline
Ctin07G0001030.1 Alkaloid SLS low borderline
Ctin07G0001030.2 Alkaloid SLS low borderline
Ctin07G0005890.1 Alkaloid SLS medium borderline
Ctin07G0014000.1 Alkaloid SLS medium borderline
Ctin07G0014010.1 Alkaloid SLS medium borderline
Ctin07G0023450.1 Alkaloid SLS medium borderline
Ctin08G0001670.1 Alkaloid SLS medium borderline
Ctin08G0018010.1 Alkaloid SLS medium borderline
Ctin08G0018010.2 Alkaloid SLS medium borderline
Ctin08G0018010.3 Alkaloid SLS medium borderline
Ctin12G0012090.1 Alkaloid SLS medium borderline
Ctin12G0012090.2 Alkaloid SLS medium borderline