PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Ctin01G0001970.1 Alkaloid T3O medium pass
Ctin01G0002660.1 Alkaloid T3O medium borderline
Ctin01G0002680.1 Alkaloid T3O medium borderline
Ctin01G0005490.1 Alkaloid T3O medium borderline
Ctin01G0007950.1 Alkaloid T3O medium borderline
Ctin01G0007960.1 Alkaloid T3O medium borderline
Ctin01G0007960.2 Alkaloid T3O medium borderline
Ctin01G0007960.3 Alkaloid T3O medium borderline
Ctin01G0007970.1 Alkaloid T3O medium borderline
Ctin01G0010670.1 Alkaloid T3O medium borderline
Ctin01G0010730.2 Alkaloid T3O medium borderline
Ctin01G0010750.1 Alkaloid T3O medium borderline
Ctin01G0010790.1 Alkaloid T3O medium borderline
Ctin01G0010810.1 Alkaloid T3O medium borderline
Ctin01G0010820.1 Alkaloid T3O medium borderline
Ctin01G0016470.1 Alkaloid T3O medium borderline
Ctin01G0016910.1 Alkaloid T3O medium borderline
Ctin01G0020190.2 Alkaloid T3O medium borderline
Ctin02G0000730.1 Alkaloid T3O low borderline
Ctin02G0001040.1 Alkaloid T3O medium borderline
Ctin02G0001050.1 Alkaloid T3O medium borderline
Ctin02G0001060.1 Alkaloid T3O medium borderline
Ctin02G0001300.1 Alkaloid T3O medium pass
Ctin02G0004540.1 Alkaloid T3O medium pass
Ctin02G0007010.1 Alkaloid T3O medium pass
Ctin02G0008900.1 Alkaloid T3O medium pass
Ctin03G0005790.1 Alkaloid T3O low borderline
Ctin03G0012240.1 Alkaloid T3O medium pass
Ctin03G0013110.1 Alkaloid T3O medium borderline
Ctin03G0015940.1 Alkaloid T3O medium pass
Ctin03G0015940.2 Alkaloid T3O medium pass
Ctin03G0020120.1 Alkaloid T3O low borderline
Ctin03G0020670.1 Alkaloid T3O medium pass
Ctin03G0022740.1 Alkaloid T3O medium borderline
Ctin03G0022760.1 Alkaloid T3O medium borderline
Ctin03G0022780.1 Alkaloid T3O medium borderline
Ctin03G0022930.1 Alkaloid T3O medium pass
Ctin03G0025050.1 Alkaloid T3O medium pass
Ctin03G0025050.3 Alkaloid T3O medium pass
Ctin03G0025050.4 Alkaloid T3O medium pass
Ctin03G0027790.1 Alkaloid T3O medium pass
Ctin03G0028380.1 Alkaloid T3O medium borderline
Ctin03G0028390.1 Alkaloid T3O medium borderline
Ctin03G0028410.1 Alkaloid T3O medium borderline
Ctin03G0030340.1 Alkaloid T3O medium borderline
Ctin04G0005220.1 Alkaloid T3O medium borderline
Ctin04G0005610.1 Alkaloid T3O medium borderline
Ctin04G0008860.1 Alkaloid T3O medium borderline
Ctin04G0010580.1 Alkaloid T3O medium borderline
Ctin04G0010690.1 Alkaloid T3O medium borderline