PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
Reset
Gene Pathway Family Confidence Status
Ctin04G0016400.1 Alkaloid T3O medium pass
Ctin04G0017470.1 Alkaloid T3O medium borderline
Ctin04G0017480.1 Alkaloid T3O medium borderline
Ctin05G0004880.1 Alkaloid T3O medium pass
Ctin05G0010670.1 Alkaloid T3O low borderline
Ctin05G0013130.1 Alkaloid T3O medium pass
Ctin05G0013940.1 Alkaloid T3O medium borderline
Ctin05G0013950.1 Alkaloid T3O medium borderline
Ctin05G0017210.1 Alkaloid T3O medium borderline
Ctin05G0021580.1 Alkaloid T3O low borderline
Ctin06G0001940.1 Alkaloid T3O medium pass
Ctin06G0011860.1 Alkaloid T3O medium borderline
Ctin06G0011880.1 Alkaloid T3O medium borderline
Ctin06G0018910.1 Alkaloid T3O medium borderline
Ctin06G0018930.1 Alkaloid T3O medium borderline
Ctin06G0018940.1 Alkaloid T3O medium borderline
Ctin06G0021730.1 Alkaloid T3O medium borderline
Ctin06G0022690.1 Alkaloid T3O medium borderline
Ctin06G0022700.1 Alkaloid T3O medium borderline
Ctin06G0024030.1 Alkaloid T3O medium borderline
Ctin06G0024040.1 Alkaloid T3O medium borderline
Ctin06G0027920.1 Alkaloid T3O medium borderline
Ctin06G0027950.1 Alkaloid T3O medium borderline
Ctin06G0027960.1 Alkaloid T3O medium borderline
Ctin06G0028000.1 Alkaloid T3O medium borderline
Ctin06G0028010.1 Alkaloid T3O medium borderline
Ctin06G0029410.1 Alkaloid T3O medium borderline
Ctin06G0029410.2 Alkaloid T3O medium borderline
Ctin06G0029430.1 Alkaloid T3O medium borderline
Ctin06G0029460.1 Alkaloid T3O medium borderline
Ctin06G0030190.1 Alkaloid T3O medium borderline
Ctin06G0030210.1 Alkaloid T3O medium borderline
Ctin06G0030220.1 Alkaloid T3O medium borderline
Ctin06G0031120.1 Alkaloid T3O medium pass
Ctin06G0031120.2 Alkaloid T3O medium pass
Ctin07G0000600.1 Alkaloid T3O medium borderline
Ctin07G0006920.1 Alkaloid T3O medium pass
Ctin07G0012190.1 Alkaloid T3O medium pass
Ctin07G0017440.1 Alkaloid T3O medium pass
Ctin07G0020290.1 Alkaloid T3O medium borderline
Ctin07G0020840.1 Alkaloid T3O medium pass
Ctin08G0007870.1 Alkaloid T3O medium borderline
Ctin08G0013330.1 Alkaloid T3O medium borderline
Ctin08G0029480.1 Alkaloid T3O medium pass
Ctin09G0000840.1 Alkaloid T3O medium borderline
Ctin09G0004990.2 Alkaloid T3O medium borderline
Ctin09G0005000.1 Alkaloid T3O medium borderline
Ctin09G0006230.1 Alkaloid T3O low borderline
Ctin09G0007140.1 Alkaloid T3O medium borderline
Ctin09G0007580.1 Alkaloid T3O medium borderline