PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Ctin09G0007610.1 Alkaloid T3O medium borderline
Ctin09G0008570.1 Alkaloid T3O low borderline
Ctin09G0008580.1 Alkaloid T3O low borderline
Ctin09G0008620.2 Alkaloid T3O medium borderline
Ctin09G0008670.1 Alkaloid T3O medium borderline
Ctin09G0008680.1 Alkaloid T3O medium borderline
Ctin09G0008680.2 Alkaloid T3O medium borderline
Ctin09G0008690.1 Alkaloid T3O medium borderline
Ctin09G0008700.1 Alkaloid T3O medium borderline
Ctin09G0010000.1 Alkaloid T3O medium borderline
Ctin09G0012590.1 Alkaloid T3O medium borderline
Ctin09G0012620.1 Alkaloid T3O medium borderline
Ctin09G0014940.1 Alkaloid T3O medium borderline
Ctin09G0016970.1 Alkaloid T3O medium borderline
Ctin09G0017050.1 Alkaloid T3O medium borderline
Ctin09G0017290.1 Alkaloid T3O medium borderline
Ctin09G0017910.1 Alkaloid T3O medium borderline
Ctin09G0017940.1 Alkaloid T3O medium borderline
Ctin09G0020120.1 Alkaloid T3O medium pass
Ctin09G0028020.1 Alkaloid T3O medium borderline
Ctin09G0028020.2 Alkaloid T3O medium borderline
Ctin09G0028030.1 Alkaloid T3O medium borderline
Ctin09G0028040.1 Alkaloid T3O medium borderline
Ctin09G0028530.1 Alkaloid T3O low borderline
Ctin09G0029250.1 Alkaloid T3O low borderline
Ctin09G0029380.1 Alkaloid T3O medium borderline
Ctin09G0029390.1 Alkaloid T3O medium borderline
Ctin10G0002360.1 Alkaloid T3O medium borderline
Ctin10G0011890.1 Alkaloid T3O low borderline
Ctin10G0020740.1 Alkaloid T3O medium pass
Ctin11G0008900.1 Alkaloid T3O medium borderline
Ctin12G0001160.1 Alkaloid T3O medium borderline
Ctin12G0016120.1 Alkaloid T3O low borderline
Ctin12G0016480.1 Alkaloid T3O medium pass
Ctin12G0017670.1 Alkaloid T3O medium borderline
Ctin12G0019310.1 Alkaloid T3O medium borderline
Ctin12G0019340.1 Alkaloid T3O medium borderline
Ctin12G0019350.1 Alkaloid T3O medium borderline
Ctin12G0019360.1 Alkaloid T3O medium borderline