PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Ctin02G0004540.1 Steroid BR6OX1/CYP85A1 medium borderline
Ctin02G0008900.1 Steroid BR6OX1/CYP85A1 medium borderline
Ctin03G0010920.1 Steroid BR6OX1/CYP85A1 low borderline
Ctin03G0027810.1 Steroid BR6OX1/CYP85A1 medium borderline
Ctin05G0004880.1 Steroid BR6OX1/CYP85A1 medium borderline
Ctin05G0009540.1 Steroid BR6OX1/CYP85A1 medium borderline
Ctin06G0018910.1 Steroid BR6OX1/CYP85A1 medium borderline
Ctin06G0021730.1 Steroid BR6OX1/CYP85A1 low borderline
Ctin06G0028020.2 Steroid BR6OX1/CYP85A1 low borderline
Ctin07G0003090.1 Steroid BR6OX1/CYP85A1 medium borderline
Ctin09G0008750.1 Steroid BR6OX1/CYP85A1 low borderline
Ctin09G0008750.2 Steroid BR6OX1/CYP85A1 low borderline
Ctin09G0008750.3 Steroid BR6OX1/CYP85A1 low borderline
Ctin09G0008760.1 Steroid BR6OX1/CYP85A1 low borderline
Ctin09G0008760.2 Steroid BR6OX1/CYP85A1 low borderline
Ctin09G0008760.3 Steroid BR6OX1/CYP85A1 low borderline
Ctin09G0008760.4 Steroid BR6OX1/CYP85A1 low borderline
Ctin09G0008760.5 Steroid BR6OX1/CYP85A1 low borderline
Ctin09G0020120.1 Steroid BR6OX1/CYP85A1 medium borderline
Ctin09G0028020.1 Steroid BR6OX1/CYP85A1 medium borderline
Ctin09G0028020.2 Steroid BR6OX1/CYP85A1 medium borderline
Ctin09G0028040.1 Steroid BR6OX1/CYP85A1 medium borderline
Ctin09G0028530.1 Steroid BR6OX1/CYP85A1 medium borderline
Ctin11G0013540.1 Steroid BR6OX1/CYP85A1 medium borderline
Ctin01G0002600.2 Steroid BR6OX2/CYP85A2 low borderline
Ctin01G0007970.1 Steroid BR6OX2/CYP85A2 low borderline
Ctin02G0000690.1 Steroid BR6OX2/CYP85A2 low borderline
Ctin02G0001790.1 Steroid BR6OX2/CYP85A2 low borderline
Ctin02G0007010.1 Steroid BR6OX2/CYP85A2 low borderline
Ctin03G0010890.1 Steroid BR6OX2/CYP85A2 low borderline
Ctin03G0010890.2 Steroid BR6OX2/CYP85A2 low borderline
Ctin03G0010950.1 Steroid BR6OX2/CYP85A2 low borderline
Ctin03G0010950.2 Steroid BR6OX2/CYP85A2 low borderline
Ctin03G0010950.3 Steroid BR6OX2/CYP85A2 low borderline
Ctin03G0022740.1 Steroid BR6OX2/CYP85A2 low borderline
Ctin03G0022760.1 Steroid BR6OX2/CYP85A2 low borderline
Ctin03G0022780.1 Steroid BR6OX2/CYP85A2 low borderline
Ctin03G0028350.1 Steroid BR6OX2/CYP85A2 low borderline
Ctin03G0028380.1 Steroid BR6OX2/CYP85A2 low borderline
Ctin03G0028390.1 Steroid BR6OX2/CYP85A2 low borderline
Ctin03G0028410.1 Steroid BR6OX2/CYP85A2 low borderline
Ctin03G0030340.1 Steroid BR6OX2/CYP85A2 low borderline
Ctin04G0004780.1 Steroid BR6OX2/CYP85A2 low borderline
Ctin04G0005300.2 Steroid BR6OX2/CYP85A2 low borderline
Ctin04G0005470.1 Steroid BR6OX2/CYP85A2 low borderline
Ctin04G0005470.3 Steroid BR6OX2/CYP85A2 low borderline
Ctin04G0005610.1 Steroid BR6OX2/CYP85A2 low borderline
Ctin04G0006280.1 Steroid BR6OX2/CYP85A2 low borderline
Ctin04G0010580.1 Steroid BR6OX2/CYP85A2 low borderline
Ctin04G0020610.2 Steroid BR6OX2/CYP85A2 low borderline