PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Ctin01G0024140.1 Terpenoid AACT low borderline
Ctin03G0004810.1 Terpenoid AACT medium borderline
Ctin03G0005420.1 Terpenoid AACT low borderline
Ctin04G0011420.1 Terpenoid AACT low borderline
Ctin05G0010750.1 Terpenoid AACT medium borderline
Ctin05G0010750.2 Terpenoid AACT medium borderline
Ctin10G0007860.1 Terpenoid AACT medium borderline
Ctin11G0026260.1 Terpenoid AACT medium borderline
Ctin01G0000260.1 Terpenoid BAHD low borderline
Ctin01G0000260.2 Terpenoid BAHD low borderline
Ctin01G0000260.3 Terpenoid BAHD low borderline
Ctin01G0004130.1 Terpenoid BAHD low borderline
Ctin01G0010640.1 Terpenoid BAHD medium pass
Ctin01G0010660.1 Terpenoid BAHD medium pass
Ctin01G0010720.1 Terpenoid BAHD medium pass
Ctin01G0012610.2 Terpenoid BAHD medium pass
Ctin01G0022210.1 Terpenoid BAHD medium pass
Ctin01G0023290.1 Terpenoid BAHD low borderline
Ctin02G0001280.1 Terpenoid BAHD medium pass
Ctin02G0005270.1 Terpenoid BAHD medium pass
Ctin02G0005430.1 Terpenoid BAHD low borderline
Ctin02G0007820.1 Terpenoid BAHD medium pass
Ctin02G0008230.1 Terpenoid BAHD medium pass
Ctin02G0008230.2 Terpenoid BAHD low borderline
Ctin02G0008230.3 Terpenoid BAHD medium pass
Ctin02G0008230.4 Terpenoid BAHD medium pass
Ctin02G0013000.1 Terpenoid BAHD medium pass
Ctin02G0014050.1 Terpenoid BAHD low borderline
Ctin02G0014070.1 Terpenoid BAHD low borderline
Ctin02G0014080.1 Terpenoid BAHD low borderline
Ctin02G0014140.1 Terpenoid BAHD low borderline
Ctin02G0014150.1 Terpenoid BAHD low borderline
Ctin02G0014270.1 Terpenoid BAHD low borderline
Ctin02G0014280.1 Terpenoid BAHD low borderline
Ctin02G0014290.1 Terpenoid BAHD low borderline
Ctin02G0014430.1 Terpenoid BAHD medium pass
Ctin02G0014440.1 Terpenoid BAHD medium pass
Ctin02G0014450.1 Terpenoid BAHD medium pass
Ctin02G0016190.1 Terpenoid BAHD medium borderline
Ctin02G0018370.1 Terpenoid BAHD medium pass
Ctin02G0018370.3 Terpenoid BAHD medium pass
Ctin02G0018370.4 Terpenoid BAHD medium pass
Ctin02G0021730.1 Terpenoid BAHD medium pass
Ctin03G0001090.1 Terpenoid BAHD medium pass
Ctin03G0007860.1 Terpenoid BAHD medium pass
Ctin03G0008900.1 Terpenoid BAHD medium pass
Ctin03G0008900.2 Terpenoid BAHD medium pass
Ctin03G0008900.3 Terpenoid BAHD medium pass
Ctin03G0008900.4 Terpenoid BAHD low borderline
Ctin03G0009460.1 Terpenoid BAHD medium pass