PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Ctin05G0016580.1 Steroid CAS medium pass
Ctin05G0016580.2 Steroid CAS medium pass
Ctin05G0016580.3 Steroid CAS medium pass
Ctin06G0014690.1 Steroid CAS medium pass
Ctin06G0014690.2 Steroid CAS medium pass
Ctin06G0020590.1 Steroid CAS medium pass
Ctin06G0032990.1 Steroid CAS medium pass
Ctin06G0033340.1 Steroid CAS low borderline
Ctin08G0009600.1 Steroid CAS medium pass
Ctin08G0009620.1 Steroid CAS medium pass
Ctin08G0027090.1 Steroid CAS low borderline
Ctin08G0031210.1 Steroid CAS low borderline
Ctin09G0007410.1 Steroid CAS medium pass
Ctin09G0007920.1 Steroid CAS medium pass
Ctin09G0017500.1 Steroid CAS medium pass
Ctin09G0027590.1 Steroid CAS low borderline
Ctin10G0001370.1 Steroid CAS medium pass
Ctin10G0001390.1 Steroid CAS low borderline
Ctin11G0018880.1 Steroid CAS low borderline
Ctin11G0018880.2 Steroid CAS low borderline
Ctin11G0018880.3 Steroid CAS low borderline
Ctin11G0018910.1 Steroid CAS medium pass
Ctin11G0018930.1 Steroid CAS medium pass
Ctin11G0018950.1 Steroid CAS low borderline
Ctin11G0018970.1 Steroid CAS low borderline
Ctin11G0018970.2 Steroid CAS low borderline
Ctin11G0018980.1 Steroid CAS medium pass
Ctin11G0018980.2 Steroid CAS medium pass
Ctin11G0026680.2 Steroid CAS low borderline
Ctin11G0026680.5 Steroid CAS medium pass
Ctin11G0026680.6 Steroid CAS medium pass
Ctin12G0001170.1 Steroid CAS low borderline
Ctin12G0015640.1 Steroid CAS medium pass
Ctin01G0005230.1 Steroid CPD/CYP90A1 medium borderline
Ctin01G0005230.2 Steroid CPD/CYP90A1 low borderline
Ctin01G0023050.1 Steroid CPD/CYP90A1 medium borderline
Ctin02G0001030.1 Steroid CPD/CYP90A1 low borderline
Ctin02G0001040.1 Steroid CPD/CYP90A1 medium borderline
Ctin02G0001050.1 Steroid CPD/CYP90A1 medium borderline
Ctin02G0001060.1 Steroid CPD/CYP90A1 medium borderline
Ctin03G0012240.1 Steroid CPD/CYP90A1 low borderline
Ctin03G0020120.1 Steroid CPD/CYP90A1 low borderline
Ctin05G0002610.1 Steroid CPD/CYP90A1 medium borderline
Ctin06G0002420.1 Steroid CPD/CYP90A1 medium borderline
Ctin06G0002420.2 Steroid CPD/CYP90A1 medium borderline
Ctin06G0002420.3 Steroid CPD/CYP90A1 medium borderline
Ctin06G0002420.4 Steroid CPD/CYP90A1 medium borderline
Ctin06G0018940.1 Steroid CPD/CYP90A1 medium borderline
Ctin06G0018940.2 Steroid CPD/CYP90A1 medium borderline
Ctin06G0030210.1 Steroid CPD/CYP90A1 low borderline