PlantSME Plant secondary metabolism enzyme database

Carthamus tinctorius (carthamus_tinctorius)

Imported from atlas release summary for Carthamus tinctorius.

2021
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 627 19 BAHD (246) View species results
Alkaloid pathway 446 22 7DLGT (95) View species results
Phenylpropanoid pathway 394 11 POD (168) View species results
Flavonoid pathway 257 12 UFGT (170) View species results
Rosmarinic acid pathway 163 7 C4H (62) View species results
Steroid pathway 134 12 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1990 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 421 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Ctin11G0016210.1 Alkaloid 7DLGT medium pass
Ctin11G0016230.1 Alkaloid 7DLGT low borderline
Ctin11G0016260.1 Alkaloid 7DLGT medium pass
Ctin11G0020060.1 Alkaloid 7DLGT low borderline
Ctin11G0020090.1 Alkaloid 7DLGT medium pass
Ctin11G0020100.1 Alkaloid 7DLGT low borderline
Ctin11G0020120.1 Alkaloid 7DLGT medium pass
Ctin11G0020130.1 Alkaloid 7DLGT low borderline
Ctin11G0020150.1 Alkaloid 7DLGT low borderline
Ctin11G0020160.1 Alkaloid 7DLGT low borderline
Ctin12G0014610.1 Alkaloid 7DLGT low borderline
Ctin12G0014640.1 Alkaloid 7DLGT low borderline
Ctin12G0014650.1 Alkaloid 7DLGT low borderline
Ctin12G0018070.1 Alkaloid 7DLGT low borderline
Ctin12G0018080.1 Alkaloid 7DLGT medium pass
Ctin12G0020210.1 Alkaloid 7DLGT low borderline
Ctin02G0001790.1 Alkaloid 7DLH medium borderline
Ctin02G0008860.1 Alkaloid 7DLH medium borderline
Ctin02G0008870.1 Alkaloid 7DLH medium borderline
Ctin04G0005300.2 Alkaloid 7DLH medium borderline
Ctin04G0005470.3 Alkaloid 7DLH medium borderline
Ctin06G0002420.2 Alkaloid 7DLH medium borderline
Ctin06G0002420.4 Alkaloid 7DLH medium borderline
Ctin06G0017790.1 Alkaloid 7DLH low borderline
Ctin06G0030390.11 Alkaloid 7DLH medium borderline
Ctin06G0030390.12 Alkaloid 7DLH low borderline
Ctin07G0004800.1 Alkaloid 7DLH medium borderline
Ctin07G0004800.2 Alkaloid 7DLH medium borderline
Ctin07G0004800.3 Alkaloid 7DLH medium borderline
Ctin07G0004800.4 Alkaloid 7DLH medium borderline
Ctin07G0004800.5 Alkaloid 7DLH medium borderline
Ctin07G0004800.6 Alkaloid 7DLH medium borderline
Ctin07G0007110.1 Alkaloid 7DLH medium borderline
Ctin07G0007120.1 Alkaloid 7DLH medium borderline
Ctin07G0007190.1 Alkaloid 7DLH medium borderline
Ctin07G0007270.3 Alkaloid 7DLH medium borderline
Ctin07G0007270.4 Alkaloid 7DLH medium borderline
Ctin07G0007280.1 Alkaloid 7DLH medium borderline
Ctin07G0007280.2 Alkaloid 7DLH medium borderline
Ctin07G0007280.3 Alkaloid 7DLH medium borderline
Ctin07G0007280.4 Alkaloid 7DLH medium borderline
Ctin07G0007290.1 Alkaloid 7DLH medium borderline
Ctin07G0007300.1 Alkaloid 7DLH medium borderline
Ctin07G0007330.1 Alkaloid 7DLH medium borderline
Ctin07G0008290.1 Alkaloid 7DLH medium borderline
Ctin07G0009530.1 Alkaloid 7DLH low borderline
Ctin07G0012970.1 Alkaloid 7DLH medium borderline
Ctin07G0012970.4 Alkaloid 7DLH medium borderline
Ctin07G0026250.1 Alkaloid 7DLH medium borderline
Ctin08G0018020.1 Alkaloid 7DLH medium borderline